Pseudomonas solani PSBB082: ACSC9U_25195
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Entry
ACSC9U_25195 CDS
T11792
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psob Pseudomonas solani PSBB082
Pathway
psob03420
Nucleotide excision repair
psob03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACSC9U_25195 (uvrD)
03430 Mismatch repair
ACSC9U_25195 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psob03400
]
ACSC9U_25195 (uvrD)
Enzymes [BR:
psob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACSC9U_25195 (uvrD)
DNA repair and recombination proteins [BR:
psob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACSC9U_25195 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ACSC9U_25195 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XXL42437
LinkDB
All DBs
Position
5583921..5586104
Genome browser
AA seq
727 aa
AA seq
DB search
MHDDLSLLLNSLNDAQRQAVAASLGRQLVLAGAGSGKTRVLVHRIAWLIQVEHASPHSIL
SVTFTNKAAAEMRHRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEAGLAENFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQAGGDLFLGTMLKIYEAYE
AACARAGVIDFSELLLRALDLWRDKPGLLAHYQRRFRHILVDEFQDTNAVQYAWLRLLAQ
GGDSLMVVGDDDQSIYGWRGARIENIQQFSSDFADAETIRLEQNYRSTAGILKAANALIA
NNQGRLGKELWTDGEDGEPLGLYAAFNEHDEARYVVESIESALKDGMARSEIAILYRSNA
QSRVLEEALLREKIPYRIYGGQRFFERAEIKNAMAYLRLLDGRGNDAALERVINVPARGI
GEKTVESIREFARGQDVSMWEAIRLLVANKGLPGRASGALAVFIELIENLAAKVLEMPLH
LMTQTVIEQTGLITYHKEEKGEKGQARVENLEELVSAARAFENNEDDEELTPLQAFLSHA
SLEAGDTQADAFEDSVQLMTLHSAKGLEFPLVFLVGMEEGLFPHKMSLEESGRLEEERRL
AYVGVTRAMQRLVLTYAETRRLYGSETYNKVSRFVREIPPQLIREVRLSNSVSRPVAGSN
RSSGSMFAGAEVPQTGFNLGQRVQHSLFGEGTILNFEGSGAQARVQVVFESEGSKWLMLA
YAKLEPL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgatctctctctactcctgaactccctgaacgacgctcaacgccaggccgta
gcggcctcactggggcgtcaattggtcctcgccggcgccggctcgggcaagacccgcgtg
ctcgtgcaccgcatcgcctggctgatccaggtggagcacgcctcgccccactcgatcctc
tcggtgaccttcaccaacaaggccgccgccgagatgcgccaccgcatcgagcagctgctg
ggcatcaacccggcgggcatgtgggtcggcaccttccacggcctggcccatcgcctgctg
cgcgcccactggcaggaagccggcctggccgagaacttccagatcctcgacagcgatgac
cagcagcgcctggtcaagcgggtgatccgcgagctgggcctggacgagcagcgctggccg
gcacgacaggcgcaatggttcatcaacgggcagaaggacgagggcctgcgcccgcagcac
atccaggccggcggcgacctgttcctcggcaccatgctgaagatctacgaagcctacgaa
gccgcctgcgcccgcgccggggtcatcgacttctccgagctgctgctgcgcgccctggac
ctgtggcgcgacaagccgggcctgctggcccactaccagcgccgcttccgccacatcctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggctgcgcctgctcgcccag
ggtggcgacagcctcatggtggtaggcgacgacgaccagtccatctacggctggcgcggc
gcccgcatcgaaaacatccagcaattctccagcgacttcgccgacgccgaaaccatccgc
ctggagcagaactaccgctccaccgccggcatcctcaaggccgccaacgccctgatcgcc
aacaaccaggggcgcctgggcaaggagctgtggaccgacggcgaggacggcgagcccctg
ggcctgtacgccgccttcaacgagcacgacgaagcccgctacgtggtggaaagcatcgaa
agcgcgctgaaggacggcatggcgcgcagcgagatcgccatcctctaccgctccaacgcc
cagtcgcgggtgctggaagaggccctgctgcgggagaagatcccctaccgcatctacggc
ggccagcgcttcttcgaacgcgccgagatcaagaacgccatggcctacctgcgcctgcta
gacggccgtggcaacgacgccgccctggagcgggtgatcaacgtccccgcccgcggcatc
ggcgagaagaccgtggaaagcatccgcgaattcgcccgcggccaggacgtctccatgtgg
gaggcgatccgcctgctggtggccaacaagggcctgccgggccgcgcatccggcgccctg
gcggtgttcatcgagctgatcgagaacctcgccgccaaggtcctggagatgcccctgcac
ctgatgactcagaccgtcatcgagcagaccgggctgatcacctaccacaaggaagaaaaa
ggcgagaaaggccaggcccgggtggaaaacctggaggaactggtcagcgccgcccgcgcc
ttcgagaacaacgaagacgacgaggaactcaccccgctgcaggccttcctcagccacgcg
tcgctggaggccggtgatacccaggccgacgccttcgaagacagcgtgcaactgatgacc
ctgcacagcgccaagggcctggaattcccgctggtgttcctggtgggcatggaagaaggc
ctgttcccccacaagatgagcctggaggaatccggccgcctggaagaggagcgccgcctg
gcctatgtcggcgtcacccgcgccatgcagcgcctggtgctgacctacgcggaaacccgc
cgcctgtacggcagcgagacctacaacaaggtctcgcgcttcgtccgcgaaatccccccg
cagctgatccgcgaagtgcgcctgagcaacagcgtcagccgtccggtggcaggcagcaac
cgcagcagcggctcgatgttcgccggcgcggaagtgccgcagaccggcttcaacctcggc
cagcgcgtgcagcattcgctattcggcgagggcaccatcctcaacttcgaaggctccggc
gcccaggcccgggtccaggtggtgttcgagagcgaaggcagcaaatggctgatgctcgcc
tacgccaagctcgaacccctctga
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