Pseudomonas solani PSBB082: ACSC9U_29925
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Entry
ACSC9U_29925 CDS
T11792
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
psob Pseudomonas solani PSBB082
Pathway
psob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACSC9U_29925 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psob03019
]
ACSC9U_29925 (pnp)
03016 Transfer RNA biogenesis [BR:
psob03016
]
ACSC9U_29925 (pnp)
Enzymes [BR:
psob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACSC9U_29925 (pnp)
Messenger RNA biogenesis [BR:
psob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACSC9U_29925 (pnp)
Transfer RNA biogenesis [BR:
psob03016
]
Prokaryotic type
tRNA degradation factors
ACSC9U_29925 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_2
S1_2
DUF7909
DUF7275
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
XXL43339
LinkDB
All DBs
Position
6606338..6608446
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AA seq
702 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTMDQDVTVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGRIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFLNEVQVICTVVST
NKKTDPDVAAMIGTSAALAISGIPFAGPIGAARVAYHESTGYLLNPNYEQLKASSLDMVV
AGTQDAVLMVESEAQELTEDQMLGGVLFAHQEFQAVINAVKEFAAEAGKPTWNWTAPVEN
TALLGAIKAEFGEAISQAYTITIKQDRYNRLGELRDQVVARFAGEEAGQFPAGEVKDAFG
LLEYRTVRENIVNGKPRIDGRDTRTVRPLKIEVGVLDKTHGSALFTRGETQALVVATLGT
ARDAQLLDTLEGERKDGFMLHYNFPPFSVGECGRMGSAGRREIGHGRLARRGVSAMLPKS
DEFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGDKFAVL
TDILGDEDHLGDMDFKVAGTAKGVTALQMDIKINGITEEIMEIALEQALEARLNILGQMN
QIIGQSRTELSANAPTMIAMKIDTDKIRDVIGKGGATIRSICEETKASIDIEDDGSVKIF
GETKEAAEAARQRVLGITAEAEIGKVYVGKVERIVDFGAFVNILPGKDGLVHISQISDKR
IDKVTDVLQEGQEVKVLVLDVDNRGRIKLSMKDVDAAEASGV
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaagaaattccagttcggtcagtcgaccgtaaccctcgagactggc
cgtatcgcccgtcaagcttccggtgccgttctggtcaccatggaccaagacgtcaccgta
ctggtgaccgtggtcggcgccaagcaagccgacccgggcaagggcttcttcccgctgtcc
gtccactaccaggaaaaaacctacgcagccggccgcatccccggtggtttcttcaagcgt
gaaggccgtccttccgagaaagagaccctgacctcgcgcctgatcgaccgtccgatccgc
ccgctgttcccggaaggtttcctcaacgaagtgcaggtcatctgcaccgtggtctccacc
aacaagaagaccgatccggacgtcgccgcgatgatcggtacttccgctgccctggccatc
tccggcattcccttcgccggcccgatcggtgccgctcgcgtggcctaccacgagagcacc
ggctacctgctgaacccgaactacgagcagctcaaggcttccagcctggacatggtcgtt
gccggtacccaggacgccgtgctgatggttgaatccgaagcccaggaactgaccgaagac
cagatgctcggtggcgtgctgttcgcccaccaggaattccaggccgtgatcaacgccgtc
aaggaattcgctgccgaagccggcaagccgacctggaactggaccgctccggtcgagaac
accgctctactcggcgccatcaaggccgagttcggcgaggccatctcccaggcctacacc
atcaccatcaagcaagaccgctacaaccgcctcggcgagctgcgtgaccaggtcgtcgcc
cgcttcgctggcgaagaagccggtcaattcccggccggtgaagtcaaggacgccttcggc
ctcctggaataccgcaccgtgcgcgagaacatcgtcaacggcaaaccgcgtatcgacggc
cgcgacacccgcaccgtacgtccgctgaagatcgaagtcggcgtgctcgacaagacccac
ggttccgccctgttcacccgtggcgaaacccaggctctggtcgttgccaccctcggtacc
gcccgtgatgcccagctgctggacaccctggaaggcgagcgcaaagacggcttcatgctg
cactacaacttcccgcccttctcggtgggcgagtgcggccgtatgggtagcgccggccgt
cgcgagatcggtcacggtcgcctggcccgtcgtggcgtttccgccatgctgccgaagagc
gatgagttcccctacaccatccgtgtggtgtcggaaatcaccgagtccaacggctccagc
tccatggcttccgtctgcggcgcctccctggccctgatggacgctggcgtgccgatgaag
gcaccggtcgctggtatcgccatgggtctggtcaaggaaggtgacaagttcgccgttctg
accgacatcctcggtgacgaagaccacctgggcgacatggacttcaaggtagccggtacc
gccaaaggcgtaaccgcgctgcagatggacatcaagatcaacggcatcaccgaagagatc
atggagatcgccctggagcaggcactggaagcacgcctgaacatcctcggtcagatgaac
cagatcatcggtcagtcccgtaccgagctgtcggccaacgctccgaccatgatcgcgatg
aagatcgacaccgacaagatccgtgacgtcatcggcaagggcggcgccaccatccgctcc
atctgcgaagagaccaaggcttccatcgacatcgaagacgatggcagcgtgaagatcttc
ggcgaaaccaaggaagctgccgaggctgcgcgtcagcgcgtactgggtatcaccgcggaa
gccgaaatcggcaaggtctacgttggcaaggtcgagcgcatcgtcgacttcggcgccttc
gtcaacatcctcccgggcaaagacggcctggtgcacatctcgcagatcagcgacaagcgc
atcgacaaggtcaccgacgtcctgcaggaaggccaggaagtgaaggtactggtgctggac
gtggacaaccgcggccgcatcaagctgtccatgaaagacgtggacgcagctgaggcttcg
ggcgtttga
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