Porphyromonas somerae: CE91St14_11660
Help
Entry
CE91St14_11660 CDS
T08199
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
psoe
Porphyromonas somerae
Pathway
psoe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CE91St14_11660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psoe03019
]
CE91St14_11660
03009 Ribosome biogenesis [BR:
psoe03009
]
CE91St14_11660
Enzymes [BR:
psoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CE91St14_11660
Messenger RNA biogenesis [BR:
psoe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CE91St14_11660
Ribosome biogenesis [BR:
psoe03009
]
Prokaryotic type
rRNA helicases
CE91St14_11660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BDE82138
LinkDB
All DBs
Position
complement(1367039..1368673)
Genome browser
AA seq
544 aa
AA seq
DB search
MTFEELGLAKPLLKAIEKMGFQTPTPIQEAVIPLLLGELKDIMALAQTGSGKTAAFGLPI
IQNITSDLKRPQALIIAPTRELCMQITRDMASYAIHMDDFSIVAVYGGASIEEQIQHIRR
GTQVVVATPGRLLDLIRRGAIALNEIKDVVLDEADEMLNMGFIDDIEEILSYIPEERHLL
LFSATMPQEIRSIVRKFMQEPTEVSVGNKQRINRNIQHIYYVVSANDRYLALKRIADYYP
NIYGIIFCKTRRSTQEVAAQLIADGYSADALHGELSQAQRDNVMGRFRNGTIQLLVATDV
AARGLDVDNLSHVIHFGLPADVESYTHRSGRTARAGKKGISIAICHARERGQIRRIEKES
GITIERAMLPTAEMICEKQLLQLVHRMEHTVPDLDAIAPYMDSVVNRLSWLDSDELIQRL
IYLEIQRMLDYYKNAAVVEEIPEAEKKSSKKRKASREEEERTSEGMDLLQINVGKRNKLY
PNKLIEMIEYCTGRKVPVGKITIFDRNATFEVARGESEEVQEALNVFQYHKQPLRVTRHK
RKRR
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgaagaactagggcttgccaagcccctactgaaagcgatcgagaagatgggc
tttcagactcctacgccgatacaagaggcggtgatccctttgcttctaggggagctgaag
gatattatggcattggctcagacggggagtggcaagacagctgcttttggattgcctatt
attcagaatatcaccagtgacctcaaacgtccacaggccttgatcatcgcccctactcgt
gagctctgtatgcagatcacgagggatatggctagctatgctatccatatggacgacttt
agtatcgtggcggtctatggtggggcatctattgaggagcagatacagcatatacggagg
ggcacacaggtggtggtagcgacacctggacggcttttggacttgatccgtagaggggct
atcgcactcaatgaaatcaaagatgtggtgctggatgaggccgatgagatgctcaatatg
ggctttatcgatgatattgaggagatcctctcttatatccctgaggagcgtcatctgctc
cttttttctgccacaatgcctcaggagatccgatctattgtgcgaaagtttatgcaagag
cccactgaggtttcggtaggaaataaacagcggatcaatcgtaacattcagcatatttac
tatgtagtgagtgctaacgaccgctatttggcgctgaagcgtattgccgactattacccc
aatatctatggcattatattctgtaaaacgaggcgtagtactcaagaggtggcagcgcaa
ttgatcgctgatgggtatagtgccgatgctctccatggagagctaagccaagcacagaga
gataatgtgatgggacgcttccggaatggaacgatccagctccttgtggcaaccgatgtg
gcagcacgagggcttgatgtggataatctatcgcacgtgatccacttcggtctgcctgcc
gatgtggagagctacacgcacagaagtggtcgcaccgcgagagcgggaaagaagggaatt
tcgatcgctatttgccatgccagggagcgagggcagattaggcgaatcgaaaaggagagt
ggtatcactatcgagcgtgcaatgctcccaacggccgagatgatctgtgagaaacaacta
ttgcagctggtgcatcgtatggagcatacggtgcctgacctggatgcgattgccccttat
atggatagtgtggtgaataggctctcctggctagatagcgacgaattgatacaacggctt
atttatctagagattcagcgaatgctggattactacaagaatgcagccgtggtggaggag
atccctgaggcggagaagaaaagctccaaaaaacgaaaggcttcccgcgaagaggaggag
agaacctcggaggggatggatttacttcaaatcaatgtgggaaagcgaaataaactctat
cccaataaactgattgagatgattgagtattgcacgggtagaaaggtgccagtggggaag
attactatttttgacagaaatgccacttttgaggtggctcgtggtgagtcggaagaggtg
caggaggctttgaatgtttttcagtaccataaacagcctcttcgggtcactcggcataag
cgtaaaagacggtaa
DBGET
integrated database retrieval system
