Porphyromonas somerae: CE91St14_12690
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Entry
CE91St14_12690 CDS
T08199
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
psoe
Porphyromonas somerae
Pathway
psoe02020
Two-component system
psoe02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psoe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CE91St14_12690
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CE91St14_12690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psoe03021
]
CE91St14_12690
Transcription machinery [BR:
psoe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CE91St14_12690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
BDE82241
LinkDB
All DBs
Position
complement(1499621..1501069)
Genome browser
AA seq
482 aa
AA seq
DB search
MTTDGHSSKLKQKLAQNLSTWQIQVMNMVMLPHTELAERVKQELIENPALEEGHDSDPDE
PLDSQSDEMQSEEEISMDDYADVDDIPETTLRRYYEGQKGADEIPFAEEQSLQESLNEQL
PLTELSERDQQIASFLVGSLDDDGYLRRSLLGISDDLAIYQGVEISEAHLTYILSVVQSL
EPAGIAARSLQECLMLQLERRKPTEVVQLARKLVRDHFDELTHKQIDRLSESTKASEEEL
RAAIRLITSLNPSPGLDFSSKLQDTLMTVIPDFEVTERDGELLVTLHSGDIPEVRVSHEF
EEQLQELTQREPKGKEEREASRFVKQKLDDARGFVEMIKQRNNTLITTMMAIVRLQREYF
LTGDVALLKPMILQDVADIVGYDVSTISRVTSTKYVQTDFGIIPLKQLFSEGITNDDGDE
VTTHSVKQLLKQLIEEEDKNNPLSDEALRHKLKEEGFTVARRTIAKYRDGLGIPIARLRK
VW
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgatggtcatagtagcaaactaaagcaaaagctcgcgcaaaacctctccacc
tggcagatacaggtgatgaatatggtgatgcttcctcatacggagctagctgagcgtgtc
aaacaggagctgatcgaaaatccagcactggaggagggacatgactcggatcctgatgag
cctcttgacagccagtctgacgagatgcaatctgaggaggagatctccatggatgactat
gcagatgtggatgacatccctgagaccactctgcgtcgctactatgaagggcagaaaggt
gctgatgagattccttttgcagaggagcagagccttcaagagtctcttaatgagcaattg
ccattaaccgaactgagtgagcgagatcagcaaattgctagtttcctcgttggtagccta
gatgatgatggttatctccggcgatcactgctgggtatttcggacgatttagcaatctac
cagggtgtagaaatatcggaagcacaccttacatatatattgagtgtagtgcagagtttg
gagcctgcagggatagcagctcgctctttgcaggagtgcctgatgctacaattggagcgt
cgtaagcctaccgaagtggtgcaactagcgcgaaagcttgtaagagaccactttgatgag
ttgactcacaagcagattgaccgtctttcagaaagtactaaagcaagtgaggaggagcta
agggcagctatccgtttgattactagtctcaatcccagtccagggctagacttttctagt
aagttgcaggatacgctgatgacggtgatacccgactttgaggttactgagcgcgatggg
gaacttctggtgacactccatagtggtgatatacccgaggtaagagtaagccatgagttt
gaggagcagctacaggaacttactcaaagagaacctaagggtaaggaggagcgtgaagca
agtcgatttgttaagcagaagcttgatgacgctcgcgggtttgtggagatgatcaagcaa
cgcaataataccctcattactaccatgatggcgattgtccggttgcagcgcgaatatttt
cttacgggtgatgtggcgttgcttaagccgatgattcttcaggatgtggccgatatagta
gggtatgatgtcagtaccatctccagggtgactagtaccaagtatgtgcaaaccgatttc
gggatcatccctttgaaacaactcttctctgagggtatcaccaatgatgacggagatgag
gtgactacgcattcggtaaagcagttgttgaagcaattgattgaggaggaggataagaat
aatcccctttccgacgaagctctccgacacaaattaaaggaggagggatttaccgtagca
cgccgaacaatagctaagtatagagatggtttgggcatacctattgcgagattgagaaaa
gtttggtaa
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