Porphyromonas somerae: CE91St14_14510
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Entry
CE91St14_14510 CDS
T08199
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psoe
Porphyromonas somerae
Pathway
psoe03420
Nucleotide excision repair
psoe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CE91St14_14510
03430 Mismatch repair
CE91St14_14510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psoe03400
]
CE91St14_14510
Enzymes [BR:
psoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CE91St14_14510
DNA repair and recombination proteins [BR:
psoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CE91St14_14510
MMR (mismatch excision repair)
Other MMR factors
CE91St14_14510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
Viral_helicase1
UvrD_C_2
RE_SinI
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BDE82423
LinkDB
All DBs
Position
complement(1725153..1726805)
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AA seq
550 aa
AA seq
DB search
MAIIITSEQTIPVDKPFKVTAGPGAGKTHWLISHIKNVVSNSNKLDVVRKVACITYTNVG
IDTITARLNMRNDVVEVCTIHSFLYANIVKPYIHLVAKEFGLELSKLVVIDDSNFKTEGI
AISVLKLINKSWVNARSYLKGLNNAMWHYSKHEYNNYKPRYPIKVGKWFVGNDCYMGFKR
WLWSGGYMSFDDVLYFSYILLSRYPHIYKLIKARYPYIFVDEFQDTIPFVVDFLTQLGNE
GVIVGVVGDKAQSIYDFLGATVQQFDSFTVPEMQEYEIRGNRRSTKQIIDLLNIVRTDFS
QDWLNGSEGMMPELLVGDMLNCYQQSIEKSGTAEIQSLAFQNVLANSMRKKNGVREDGKI
LEIYIDSNVRRQIIIKTLIKAVEYTRMNDLRNAWHQLDIINRDRTITIVALRRLLDGYKD
YKDGSLMDFYNFLVNDLQLKITKIRGKAIKDFYLNHTYADAALGVKYGDSNDKHKTIHKS
KGEEFDNVFVILEKEEDLEFLLSPNLDENNVHRVYYVAASRAIKRLFICVPTLSAENYIK
LKNMPINIPS
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggctattatcataacatcagagcaaaccatacctgtagacaaaccatttaaggtgact
gctggacctggtgctggaaagacacattggttgataagtcatatcaagaatgtagtatct
aacagcaacaaacttgatgtggtgaggaaggtggcttgtatcacttataccaatgtgggt
atcgacaccatcacagcacgtttgaatatgaggaatgacgtggttgaggtatgtaccatc
catagtttcttgtatgccaatatagtaaagccctatattcatctggtagctaaagaattt
gggctggagttgagcaaacttgtggttatagatgactctaattttaagacagaaggaata
gctatatcagtattgaagcttattaataagtcatgggtgaatgctagaagctatctgaaa
ggtttgaataatgctatgtggcattattcaaagcatgaatacaacaattataaaccaagg
tacccaataaaggtcggcaagtggttcgtgggcaatgactgctatatggggttcaaaaga
tggctatggagtggagggtatatgtcctttgatgatgttttatacttctcttacattcta
ctttcgagatacccacatatatacaaattgataaaggcgaggtatccatatattttcgtg
gatgagtttcaagatacaattccttttgttgttgacttccttacccagttaggcaatgag
ggggtaattgtgggagtagttggcgataaagcacaatcaatctatgattttctcggtgct
acggtgcagcaatttgatagttttactgttccagaaatgcaggagtatgagatacgagga
aataggcgtagcacgaagcagataatagatttactaaatattgtcagaactgatttttcg
caagactggttgaatggatcagaaggaatgatgccggaattgctagttggcgatatgctt
aactgctaccaacagagtatagaaaagagtggaactgccgaaatacaatcactggccttt
caaaacgtacttgccaattcaatgcgtaagaagaacggagtgagagaagacggaaaaata
ttagagatttatattgacagcaatgtaaggcgtcagatcattataaagacgttgattaag
gccgtggaatatacaagaatgaatgacttgcgaaatgcttggcatcaactagacatcatc
aatcgcgatagaacaataacaattgtggctctaagacgtttgctagatggctataaggac
tataaagacggaagcctgatggatttctacaattttctggtgaatgatttacaactcaag
ataactaagataagaggcaaggcaatcaaggatttctacttaaaccatacatacgctgat
gctgcccttggggtgaagtatggtgattcaaatgacaagcataagactatccacaaatca
aaaggagaggagttcgataacgtctttgtgattcttgaaaaggaggaagacttggagttt
ctgttgtctccaaacctagatgaaaacaatgtccatcgggtgtattatgtggctgctagt
cgtgcaataaaacgcttgtttatctgtgtacccacattgagtgcagaaaactatatcaaa
ctgaagaacatgccaataaatataccttcttag
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