Porphyromonas somerae: CE91St14_17010
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Entry
CE91St14_17010 CDS
T08199
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psoe
Porphyromonas somerae
Brite
KEGG Orthology (KO) [BR:
psoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psoe03016
]
CE91St14_17010 (truB)
Enzymes [BR:
psoe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CE91St14_17010 (truB)
Transfer RNA biogenesis [BR:
psoe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CE91St14_17010 (truB)
Prokaryotic type
CE91St14_17010 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BDE82673
LinkDB
All DBs
Position
2028834..2029577
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AA seq
247 aa
AA seq
DB search
MMQKSQRDHKSHEVPQNIFSDGTFVVVDKPLKWTSFDVVNKFRWLLCKKLGVKRLKVGHA
GTLDPLATGVVVLCTGRYTKRIEEVQKLPKEYTATLKLGATTPSFDLESEEDATFSTEHI
TREKVEEVLKQYEGVIPQVPPIFSAVKVAGSRAYELARKGEGVELQAKEVRIDRIELLVY
SLPYIRIRVVCGKGTYIRALARDIGRSLECGAYLTALRRESVGEFRASEGIGVEQFEEYI
EERMTID
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaagagccaaagagatcataagtcgcacgaagtgcctcagaatattttttcg
gatggtacctttgtggtggtggataagccactcaagtggaccagctttgatgtggtgaat
aaatttaggtggctactttgtaaaaagctcggagtgaagcggctcaaggtggggcatgcg
gggacgctcgacccacttgctacgggggtggtagtgctctgcactggccgatacacgaaa
cggatagaggaggtacagaagttgccgaaagagtatacggcgacgctgaagctgggggca
acgacgccttcctttgaccttgagagtgaagaggatgccacattctccacggagcatatc
acgagggaaaaggtggaggaggtgctgaagcaatacgagggggtgataccgcaggtgcca
ccaatattctcggcagtaaaggtggcgggtagccgtgcctatgaattggcccgaaaggga
gagggggtggagctacaggcgaaggaggtgcggattgaccgtattgagctactggtgtac
agcttaccctacattcgcatcagggtggtgtgtggcaagggaacctatatcagggctttg
gcaagggatatcgggaggtcgctagagtgtggtgcttatctgaccgcccttcgccgtgaa
tcggtgggggagtttagagcatcggagggaattggggtggagcagtttgaggagtatatt
gaggaacgtatgactattgactaa
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integrated database retrieval system
