Porphyromonas somerae: CE91St14_21640
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Entry
CE91St14_21640 CDS
T08199
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
psoe
Porphyromonas somerae
Pathway
psoe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psoe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CE91St14_21640 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psoe03021
]
CE91St14_21640 (rpoA)
03400 DNA repair and recombination proteins [BR:
psoe03400
]
CE91St14_21640 (rpoA)
Enzymes [BR:
psoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CE91St14_21640 (rpoA)
Transcription machinery [BR:
psoe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CE91St14_21640 (rpoA)
DNA repair and recombination proteins [BR:
psoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CE91St14_21640 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_A_bac
RNA_pol_L
RNA_pol_L_2
Mltc_N
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
BDE83136
LinkDB
All DBs
Position
2632219..2633217
Genome browser
AA seq
332 aa
AA seq
DB search
MALIAFQKPENVLMLEGTATHGKFEFKPLEPGYGMTIGNALRRILLSSPEGFAINSIKID
GVEHEFATIPGVIEDVTNIILNLKKIRLKQVTPGEVGETAVIKVNGKSSDTFTGKEISEG
LKSFEVLNKDQLICRLDKSASFSIQLTIDQGRGWIPASDIAESFDDPLQIAIDAIYTPIL
NVKIAVENTRVGQKTDYDKLLIEIDTDGSIHPKEALKNAAHLLIQHLELFSDEYFSVDLE
SEQEEEDFDENTLMTRQLLKNRLEDVELSVRAFNCLRAAGVLTLGDLVKYSRSELLKFRN
FGKKSLNEVDELLDNLGLTFGMDLSKYKLDNE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggctttaatcgcattccaaaaaccagaaaacgtgcttatgctcgagggtactgctaca
catggcaagttcgagtttaagccacttgagccaggctatggcatgactataggtaatgct
cttcgacgtattttgctctccagccctgagggctttgccatcaatagcatcaagattgat
ggggtagagcatgagtttgcaaccataccaggtgtcatagaggacgtcaccaacatcatc
ctgaacctcaagaagattcgtctcaagcaggtgaccccaggtgaagttggcgagactgct
gttatcaaagtcaatggtaagagcagcgatacctttacagggaaagagatttcagaggga
cttaagagctttgaggtcctcaataaggatcagcttatttgtcggttagataagtcagct
tccttcagtatccaattgaccattgatcaaggtcgtggctggatcccagcttcggatatt
gcagagagtttcgacgacccattacagattgctattgatgctatctatacacctattctc
aacgtaaagattgctgtagagaatacacgtgtgggtcagaagaccgattacgataagctt
ttgattgagattgataccgatggctccattcatccaaaagaggcactgaagaatgctgct
catctgctgattcagcacctagagctattcagcgatgagtatttctcagtagaccttgag
tctgagcaagaggaggaagactttgacgagaataccctaatgactcgtcagcttctcaag
aataggctagaggatgtagagctatcagtgagagcattcaattgcctacgcgctgcaggc
gtgctcacccttggtgacctcgtcaagtacagtcgtagcgagctcctcaagttcagaaac
ttcggtaagaagtctctcaacgaggtagatgaattgctcgataaccttgggctcaccttt
ggaatggacctttcgaagtacaaactagacaacgagtaa
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