Propioniciclava soli: PCC79_09815
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Entry
PCC79_09815 CDS
T10107
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
psoi Propioniciclava soli
Pathway
psoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PCC79_09815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psoi03400
]
PCC79_09815
Enzymes [BR:
psoi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PCC79_09815
DNA repair and recombination proteins [BR:
psoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PCC79_09815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
PDDEXK_1
Viral_helicase1
AAA_22
RcnB
Motif
Other DBs
NCBI-ProteinID:
WZW97215
LinkDB
All DBs
Position
2177950..2181372
Genome browser
AA seq
1140 aa
AA seq
DB search
MSGFNEAATFHLTGPLPRGVTVLEASAGTGKTHAIAALATRFVAEGAVDISALLLVTFSR
AATAELRLRVRTRLRESAEALRAATSGVTPGDAVDRALTDGVPPEEVAMRAARLEAAFAD
VDRATIMTTHEFCHAMLRGLGILAPQTPQSHLTEDLGWLADEVAADLYVQRYAQGDTPPP
FPFAGAASERDDPGAREIARAAVHDAALLGGTDAPGAAGERAAFAAAVRAEVDRRKGRLR
LFSFDDQLTRLDAALADPRTGELARTRLAERFPVVLVDEFQDTDPVQWSVLQQAFAPSST
VVLIGDPKQAIYGFRGGDVHLYTSATREAGALTTLRTNHRSDPGVVAGVATLFEGIALGE
DIDVPAVAAARAPRLRGRPGTAWERGVQLRTLEAEKAISPWQAGDAIAADLVAVVTDLLG
PDAPLRRADPAAAGLRPKDVAILVRSNGRGADLAAALTSVGIAATFSGTSSVFASDAARD
WLTLLQALDRRRRPYLQRAWLTSFVGATVADLARADDTRTAAWSLWLHTWARVLGRGGVW
ALLAAIERDTDLSARLLACPGGERRVTDHHHLAEMLHERTTAGTPARPRELALWLAREIE
RASGDAERTRRLETDADAVQIMTIHRAKGLQWPVVLLPDAGASRKEPTDRGQALIVPGTD
GRTLDVGGRRGAGRPDRWERWLVEEGDEALRALYVGLTRAESHVVAWWAHHWNTPTAPLH
RLLQATRSADAPTRPRLAYPTDDLPAGGSPRLVDWLAGTQVGVTLLGDSVTVSGADDQKS
PATAVAWPGAAERPAPSDLAVRAWRRTIDRGWRRTSYSGLTADVHELAHPIAEGPFVSDE
PDEAGPPSGPGTPGPAEPTAPSADPRLAQPSPMAALPAGPAFGSLVHEVYEHVDATGVDW
RDRLAGAVEAALVRWPVGGVDPAELAEAIAPTLLTPLGDLAPGAVLRDFGPGDRLSELDF
EFPLANPRATVADLAELLTTHLGAGDPLAGYAERLAHPLLAEQQLHGFLTGSIDAVLRLA
GPTRRPGYVVVDYKTNRLSAPGEALTLGHYTPAAMAEGMMASHYPLQALLYCVALHRFLA
QRLAGYDPERDLAGVAYLFVRGMAGADTPVVGGAPLGVFTWHPPAELVLAVSRLLAGGAS
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggttcaacgaggccgcgacgttccacctgaccgggcccctgccgcgcggggtg
acggtgctggaggcctcggcggggacggggaagacccacgccatcgccgcgctggccacc
cggttcgtcgccgagggcgcggtggacatctccgcgttgctgcttgtcaccttctcccgg
gccgcgaccgccgagctgcggctgcgggtccgcacgcgcctgcgggagtcggccgaggcg
ctgcgcgcggccaccagcggcgtcacgcccggcgacgcggtggatcgtgccctcaccgac
ggggtgccccccgaggaggtcgcgatgcgcgcggcgcgcctggaggccgcattcgccgac
gtggaccgggccacgatcatgaccacccacgagttctgccacgccatgctccgcggcctc
ggcatcctggcaccgcagacgccccagtcgcacctgaccgaggatctggggtggctcgcc
gacgaggtcgccgccgacctctacgtgcagcgctacgcccagggcgacaccccgcccccg
ttcccgttcgcgggcgccgcgtccgaacgcgacgatcccggcgcccgggagatcgcccgc
gccgccgtgcacgacgcggccctgctcggcggcaccgacgccccgggcgcggcgggcgag
cgggcggccttcgcggcggccgtccgggccgaggtcgatcgccgcaagggccgcctgcgt
ctgttcagcttcgacgaccagctgacccggctggacgcagcgctggccgacccgcgcacc
ggagagctggcccgcacccggctcgccgagcggttcccggtcgtcctcgtcgatgagttc
caggacaccgatccggtgcagtggagcgtgctccagcaggcgttcgcaccctcctccacc
gtggtgttgatcggtgaccccaagcaggccatctacggcttccgcggcggcgacgtgcac
ctctacacgagcgccacgcgggaggccggcgccctcacgacgctgcgcacgaaccaccgg
tccgacccgggtgtggtcgccggcgtcgccaccctgttcgagggcatcgccctgggtgag
gacatcgacgtgccggccgtggcggccgcccgagcgccccggttgcgggggcgtccgggc
accgcctgggagcggggcgtgcagctgcgcaccctggaggccgagaaggccatcagcccg
tggcaggccggtgacgcgatcgccgccgacctggtggcggtggtgacggacctgctcggc
ccggacgccccgctgcgccgggcggaccccgctgccgcaggactgcggccgaaggacgtc
gccatcctcgtccgctcgaacgggcggggagccgatctcgcggccgccctgacgtcggtg
gggatcgcggcgacattctccggcacgtcgagcgtgttcgcctccgacgccgcccgcgac
tggctgacgctgctgcaggcgctggatcgccggcggcgtccgtacctgcaacgcgcctgg
ttgacgtcgttcgtgggggcaacggtggccgatctggcccgcgccgacgacacccggacg
gcggcctggtcgctgtggctgcacacctgggcccgggtgctggggcgcggtggcgtctgg
gcgctgctcgccgcgatcgagcgcgacacggacctctcggcgcgcctgctggcgtgcccg
ggcggggagcgcagggtgaccgaccaccaccacctcgccgagatgctgcacgagcggacc
acggccggcaccccggcccgcccccgggagctggccctctggctggcgcgcgagatcgag
cgcgcctcgggtgacgccgagcgaacccggcgcctggagaccgacgccgacgccgtccag
atcatgacgatccaccgggcgaagggcttgcagtggccggtggtgttgctgccggacgcc
ggggcctcgcgcaaggagccgaccgaccggggtcaggcgctgatcgtgcccggcacggac
ggccgcacgctcgacgtgggtgggcgtcgcggcgcggggcgtccggatcgctgggagcgc
tggctggtcgaggagggcgatgaggcgctgcgggccctgtacgtcgggctgacccgggcc
gagtcgcacgtggtggcctggtgggcgcaccactggaacaccccgacggcgccgttgcac
cggctgctgcaggccacgcgttcggccgacgcacccacccggccccgcctcgcctacccc
accgacgacctgcccgccgggggcagcccgcgcttggtggactggttggccggcacccag
gtcggcgtcaccctgctcggcgactccgtcaccgtttccggggcggacgaccagaagtca
cccgccaccgcggtcgcctggcccggggcggcggagcgtcccgcgccgtcggacctcgcg
gttcgggcgtggcggcgcacgatcgaccgggggtggcgccgcacgtcctactcgggcctg
accgccgatgtccacgagctcgcgcaccccatcgccgagggacccttcgtctccgacgaa
cccgacgaggcggggccgccgtccggacccgggacgcccggcccggcggagccgactgcc
ccgtcggccgatccccgcctggcgcaaccctcaccgatggccgcgctgcccgcgggcccg
gcgttcggcagcctcgtgcacgaggtgtacgaacacgtggacgccacgggcgtcgattgg
cgcgaccggctcgccggcgccgtcgaggcggcgctagtgcggtggccggtgggcggggtg
gatccggcggagctggccgaggcgatagcccccaccttgctgacgccgctgggagatctc
gccccgggtgcggtgctgcgcgacttcggaccgggcgaccggctcagcgagctggacttc
gaatttcccctggccaacccgcgcgccaccgtggccgacctggcggagctgctgacaacc
cacctgggcgccggcgatccgctcgccggctacgccgagcggttggcgcaccccctgctg
gccgagcagcaactgcacggcttcctcaccgggtccatcgacgcggtgttgcgcctggcc
gggcccacgcgccggcccggttacgtggtcgtcgactacaagaccaaccggctgtcggcg
cccggggaggcgctgacgctcgggcactacacccccgccgcgatggccgagggcatgatg
gcaagccactaccccctgcaggccctgctgtactgcgtcgccctgcaccgcttcctcgcc
cagcggctggcgggttacgacccggagcgcgacctcgccggggtcgcctacctgttcgtg
cgcggcatggcgggtgcggacacccccgtcgtgggcggggcgccgctgggcgtgttcacc
tggcacccccccgcggaactggtgctcgccgtctcccgtctgctcgccggaggtgcatcg
tga
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