Propioniciclava soli: PCC79_12175
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Entry
PCC79_12175 CDS
T10107
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
psoi Propioniciclava soli
Pathway
psoi03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
psoi00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
PCC79_12175 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
psoi03011
]
PCC79_12175 (rpsA)
Ribosome [BR:
psoi03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
PCC79_12175 (rpsA)
Bacteria
PCC79_12175 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
DUF2187
DUF2110
Motif
Other DBs
NCBI-ProteinID:
WZW97653
LinkDB
All DBs
Position
complement(2699680..2701161)
Genome browser
AA seq
493 aa
AA seq
DB search
MTSTPEAAQVAVDDFMSSEEFAAAVDATIKYFNDGDIVTGTVVKVDRDEVLLDIGYKTEG
VIPSKELSIKHDVDPFEVVAVGDEIEALVQQKEDKEGRLILSKKRAQYERAWGQIEQVKE
SDGVVTGRVIEVVKGGLIVDIGLRGFLPASLVEMRRVRDLQPYVGQELEAKIIELDKNRN
NVVLSRRAWLEQTQSEVRTSFLNQLAKGQIRRGVVSSIVNFGAFVDLGGVDGLVHVSELS
WKHIDHPSEVVEVGNEVTVEVLDVDMDRERVSLSLKATQEDPWQTFARTHQIGHIVPGKV
TKLVPFGAFVRVEEGIEGLVHVSELAERHVEIPEQVVAVNDDVMVKIIDIDLERRRISLS
LKQANEGVDVAADDFDPSLYGMTASYDDQGNYIYPEGFDPETQEWKPGYEEQQRAWEQQY
AEAQTRWLAHKKQVEEAEAAENQAAVEATAQSSYSSGGRPSASTSSSSSSAPEGSLASDE
ALQALRDKLTGGR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgacctccactcctgaggccgctcaggtcgcggtcgacgacttcatgagcagcgaagag
ttcgctgccgccgtcgacgccacaatcaagtacttcaatgacggtgacatcgtcaccggt
accgtcgtcaaggtcgaccgggacgaggttctcctcgacatcggctacaagaccgagggc
gtcatcccctccaaggaactctccatcaagcacgacgtcgaccccttcgaggtcgttgcc
gtcggcgacgagatcgaagccctcgtccagcagaaggaggacaaggaggggcggctgatc
ctgtccaagaagcgcgcccagtacgagcgcgcctggggccagatcgagcaggtcaaggag
tccgacggcgtggtcaccggccgcgtcatcgaggtcgtcaagggtggtctgatcgtcgac
atcggtctccgcggcttcctcccggcctccctggtcgagatgcgccgcgtccgcgacctg
cagccctacgtgggccaggagctcgaggccaagatcatcgagctggacaagaaccgcaac
aacgtcgtgctcagccgccgcgcgtggctggagcagacccagtccgaggtgcgcacgtcc
ttcctcaaccagctcgccaagggccagatccgccgcggcgtcgtgtccagcatcgtcaac
ttcggtgcgttcgtggatctcggcggtgtcgacggcctggtgcacgtctccgagctgagc
tggaagcacatcgaccacccgagcgaggtcgtcgaggtcggcaatgaggtcaccgtggag
gtgctcgatgtcgacatggaccgcgagcgcgtctccctgtcgctgaaggcgacgcaggag
gatccgtggcagaccttcgcccggacccaccagatcggccacatcgtgcccggcaaggtc
accaagctcgttccgttcggcgcgttcgtgcgtgtcgaggagggcatcgagggcctggtg
cacgtctccgagctggccgagcgtcacgtcgagatccccgagcaggtcgtcgcggtcaac
gacgacgtcatggtcaagatcatcgacatcgacctcgagcgtcgccgcatcagcctcagc
ctcaagcaggccaacgagggtgtcgacgtggctgcggacgacttcgacccgtcgctgtac
ggcatgaccgccagctacgacgaccagggcaactacatctaccccgagggcttcgatccg
gagacccaggagtggaagcccgggtacgaggagcagcagcgcgcctgggagcagcagtac
gccgaggcgcagacccggtggctggcgcacaagaagcaggtcgaggaggccgaggccgcc
gagaaccaggcggccgtcgaggccaccgcgcagtcgtcctactcctcgggcggtcgcccg
tcggcgtcgacgtcgtcctccagcagcagcgcccccgagggctcgctggcgtccgacgag
gccctgcaggccctgcgcgacaagctcaccggcggtcgctga
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