Propioniciclava soli: PCC79_12480
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Entry
PCC79_12480 CDS
T10107
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psoi Propioniciclava soli
Pathway
psoi03030
DNA replication
psoi03430
Mismatch repair
psoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PCC79_12480
03430 Mismatch repair
PCC79_12480
03440 Homologous recombination
PCC79_12480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psoi03032
]
PCC79_12480
03400 DNA repair and recombination proteins [BR:
psoi03400
]
PCC79_12480
Enzymes [BR:
psoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PCC79_12480
DNA replication proteins [BR:
psoi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PCC79_12480
DNA repair and recombination proteins [BR:
psoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PCC79_12480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
GIY-YIG
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WZW97710
UniProt:
A0ABZ3C569
LinkDB
All DBs
Position
2766566..2768305
Genome browser
AA seq
579 aa
AA seq
DB search
MRSPAPLQPSFDDLGHPLATTVFVVVDLETTGSGPQASITEIGAVRVCGGEVTGEFQTLV
NPAEAIPPLISVLTGITNAMVVGAPRVAEVLPSFWEFARGAVLVAHNAAFDMGFLKRAGA
ALDTPWSNPPVVDTVALARGVLMRDEVPNVKLATLAHHFRTPVEPNHRALTDARATVHVL
HALLERVGNLGVATMEDLLEFTRGVSPERRAKRTWASDLPAAPGVYTFVADLPDRDGVVR
RQVLYVGKSVNIRSRVRSYFTAAEKRPRMEEMVRVSTGVEATVCRTPLEAEVLELRLIAA
HAPRYNRRSKFPERQHWLKLTREPYPRFSIVRKVADDGGTYLGPFGRRQGAEEAMFALHD
AFALRQCTERLSERRPGTPCALGEMGRCVSPCDGTVSRAEYTELSDRVRVVLDADVRPVL
TSQRERLAHLIAAERFEDAGRVTARLGSFVRAATRTRRLAALAGCPQIVAACRTDVGWEI
HVIRFGRLAAAAVARPGEVPQAVARDAVTAAERVERPVPGLPAATIEEAERVAAWLERPG
VRLLEIEGEWSWPLHGSIALDDLPRHALAAASPAPAGSG
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcgttccccggccccgctccagcccagcttcgacgatctcggtcaccccctggccacc
accgtgttcgtggtggtcgacctcgagaccaccggcagcgggccgcaggcgtccatcacc
gagatcggcgcggtgcgggtgtgtggcggtgaggtcaccggtgagttccagaccctggtc
aaccccgccgaggcgattccgccgctcatcagcgtgctcacgggcatcaccaacgcgatg
gtggtgggcgccccgcgggtcgcggaggtgttgccctcgttctgggagttcgcgcggggg
gccgtcctggtcgcccacaacgccgccttcgacatgggcttcctcaaacgcgcgggggcg
gcgctcgacacgccgtggagcaacccgccggtcgtcgacaccgtggcgctggcccgcggg
gttctgatgcgcgacgaggtgcccaacgtcaagctggcgacgctggcccaccactttcgc
accccggtcgagcccaaccaccgggcgctcacggacgcccgggcgaccgtccacgtcctg
cacgcgctgctggagcgcgtgggcaacctgggcgtcgccacgatggaggatctgctggag
ttcacccgcggcgtctcccccgagcgccgcgccaagcgcacgtgggcgtccgacctgccg
gcagctccgggggtgtacaccttcgtcgccgacctgcccgaccgcgacggggtcgtgcgg
cgccaggtgctctacgtgggcaagagcgtcaacatccgctcccgcgtccgctcctacttc
accgcggccgagaagcgcccgcgcatggaggagatggtgcgggtgtccaccggggtggag
gccacggtgtgccgcacgccgttggaggcggaggtgctggagctgcgtctcatcgccgcg
cacgcgccgcgctacaaccggcgctccaagttccccgaacgccagcactggttgaagctg
acccgcgagccgtacccgcgcttctcgatcgtgcgaaaggtggccgacgacggcggcacc
tacctgggcccgttcggacgccgccagggcgccgaggaggcgatgttcgccctccacgac
gccttcgcgctgcggcagtgcaccgagcggctctccgaacggcggccggggacgccgtgt
gccctcggtgagatgggacgctgcgtctctccgtgcgacggcacggtgagccgcgccgag
tacaccgaactgagcgatcgggtgcgggtggtgttggacgccgacgtccggccggtgttg
acttcgcaacgggagcggctggcgcacctcatcgccgccgagcggttcgaggacgcgggg
cgggtcacggcgcggctcggcagcttcgtgcgggcggccacccgcacaaggcggctcgcg
gcactcgccgggtgcccccagatcgtcgccgcctgccggacggacgtgggctgggagatc
cacgtcatccgcttcggacgcctcgccgcggcggccgtcgcacgcccgggagaggtgccc
caagccgtggcacgggacgcggtgacggcggccgaacgcgtcgagcggccggtgccgggg
ctcccggcggcgacgatcgaggaggccgagcgggtggcagcgtggctggagcggcccggc
gtccgcctccttgagatcgagggcgagtggagttggccgctgcacggctccatcgcgctg
gacgacctgccccggcacgcgctggccgcggcgtcaccggcaccggccgggagtggttag
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