Propioniciclava soli: PCC79_14965
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Entry
PCC79_14965 CDS
T10107
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psoi Propioniciclava soli
Brite
KEGG Orthology (KO) [BR:
psoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psoi03032
]
PCC79_14965
03400 DNA repair and recombination proteins [BR:
psoi03400
]
PCC79_14965
Enzymes [BR:
psoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PCC79_14965
DNA replication proteins [BR:
psoi03032
]
Prokaryotic type
DNA Topoisomerases
PCC79_14965
DNA repair and recombination proteins [BR:
psoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PCC79_14965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
CarbopepD_reg_2
Motif
Other DBs
NCBI-ProteinID:
WZW98171
LinkDB
All DBs
Position
3311327..3312325
Genome browser
AA seq
332 aa
AA seq
DB search
MPRLRRVSPRQPGWTRRKRGSGFSYTDTDGAALPAEDVARIKTLVIPPAWTDVWICPHPT
GHLQAVGTDAAGRRQYLYHPDWRVRRDRSKFTRVTSAAALLPQARKRISKDLALDGMPLE
RAAATAVRLLDVGYFRIGNDAYTDANGSFGLTTLERQHVRRREQALVFSFIGKSGISHAI
TVEDAPAVAALDAMRTRRDDSHRLLAYRVNRAWHDLGSAEVNAYLAELFGGTLTAKDFRT
WHAGVIAAEVLALSEEPGATKASRTRAVRQATLEVAGYLGNTPTVARSSYIDPRIIDAYE
SGTTIGEAARRRYRTPQARQAGLEKAVLGMLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcctgcgccgcgtcagcccccgccagccgggctggacccggcgcaagcgcggc
tcgggcttcagctacaccgacaccgacggcgccgcgctccccgccgaggacgtggcgcgc
atcaagaccctcgtgatcccgcccgcctggaccgacgtgtggatctgcccgcaccccacc
gggcacctgcaggccgtcggcacggacgctgccgggcgccggcagtacctctaccacccc
gactggcgggtgcgccgcgaccggtcgaagttcacgcgcgtgacctcggcggcggccctg
ctgccccaagcccgcaagcgcatcagcaaggatctggccctcgacggcatgcccctggag
cgggccgcggccacggccgtccggctgctcgacgtcgggtacttccgcatcggcaacgac
gcctacaccgacgccaacggctccttcgggctgacgacgctggagcgccagcacgtccgc
cgccgcgagcaggcgctggtgttctcgttcatcggcaagtccggcatcagccacgcgatc
acggtcgaggacgcccccgcggtcgccgcgctcgacgccatgcgcacccgccgcgacgac
agccaccggttgctcgcctaccgggtgaaccgggcgtggcacgacctgggcagcgcggag
gtcaacgcgtacctggccgagctgttcggcggcacgctgaccgcgaaggacttccgcacg
tggcacgccggcgtcatcgccgccgaggtgctggcgctgtcggaggaaccgggcgcgacg
aaggcgtcccggacgcgggccgtccggcaggcgacgctggaggtcgccggctacctcggc
aacacacccaccgtggcccgctcctcctacatcgacccgcggatcatcgacgcctacgag
tccggcaccaccatcggcgaggcggcccggcgacgctaccggacgccgcaggcgcgccag
gccggcctggagaaggccgtcctgggcatgctgggctga
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