Phytophthora sojae: PHYSODRAFT_251824
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Entry
PHYSODRAFT_251824 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K14407
cleavage stimulation factor subunit 2
Organism
psoj
Phytophthora sojae
Pathway
psoj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PHYSODRAFT_251824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psoj03019
]
PHYSODRAFT_251824
Messenger RNA biogenesis [BR:
psoj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
PHYSODRAFT_251824
U7-dependent histone pre-mRNA processing factors
PHYSODRAFT_251824
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
RRM_10
RRM_7
RRM_occluded
CSTF_C
RrnaAD
Motif
Other DBs
NCBI-GeneID:
20638198
NCBI-ProteinID:
XP_009537811
JGI:
Physo3_251824
UniProt:
G5ACH3
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MSNKSRASSAKERSVFVGNIPYDVTEDMLKEIFSEAGSVVNFRLVTDRETGKPKGYGFCE
YADGATALSAMRNLNGYEINGRNLRVDFADGGDKSGGADRKRHDNGSHARHGGTSGSNFR
NGGSDGGPPTMVTGEMAIHAIESAIARLGPVKLYDMLVQLKEHARQKPEVTKSILMANPA
LTHAIVQSFKTLQIPIPSSTETQPVLLAPPPMMHQPPLMAGRMMPPPPRPLMGGHMGPGP
GILGMAPPGVQPGMMNPAPAPAPAKSGGTRWSARPGPLAAQATSSAMGGRPAVGIPASSP
MHAQPQPGLMPTPTGPPQSSGPPSSNLAHASRDPRRAGRDPRLAKRPYPGEQGLAPPTGD
NDPSKRSKPSGFGADAAPGGQFDAIAELARDMTPQKLDMLPPNERQMLLAFMQQNNIPF
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataagtcgcgcgcgagctccgccaaggagcgcagcgttttcgtcggaaacatc
ccgtacgatgtgacagaggacatgctcaaggaaatcttctcggaggcgggctccgtcgtg
aatttccgcctcgtgacggaccgagagaccggcaagcccaagggctacggcttctgtgag
tatgcggacggagcgacggcgcttagcgccatgcgcaacctcaacggatacgagatcaac
ggccgcaacctccgcgtggactttgcggacggcggcgacaagtctggaggagcggacagg
aaacgccacgacaatggcagtcacgcccgccatggagggaccagcggcagcaactttagg
aacggcgggtccgatggaggacctccaacgatggtgacgggcgagatggcgatccacgcc
atcgagtcggccattgctcggctgggtccggtcaaactctacgacatgctggtgcagctc
aaggagcacgcgagacagaaaccggaggtcaccaagagcatcctgatggccaacccggca
ctcacccacgcgatcgttcagagcttcaaaacgctgcagatccccattccgtcgtcgacg
gagacgcaaccggtgctgctggcccctcctccaatgatgcaccagcctccgctgatggcg
ggacggatgatgccgcctccgccacgcccgctgatgggagggcatatgggtcctgggcca
ggcatcctcggcatggcgcctcctggagttcagccgggaatgatgaatcctgcacccgca
ccagctccggcaaagtctggtggtacgcgctggagtgcgcggcctggacctctggctgct
caagccacgagctccgctatgggcggccgaccagcagtaggcattccggcgtctagcccg
atgcacgctcagcctcaaccgggcttgatgccaactccgactggtccgccgcagagtagc
gggcctccgagcagcaacttggcgcacgccagccgtgaccctcgacgtgcaggccgagac
cctcgtttggcaaagagaccgtatcccggcgagcaagggctggcaccgccgacaggagac
aatgacccgtccaagcggtccaagccgagcggttttggtgcggacgctgcgcctggcgga
cagttcgacgccatcgccgaactcgcgcgcgacatgaccccgcagaagctggacatgctg
ccgcctaacgagcgacaaatgctgctggccttcatgcagcagaacaacattccgttttaa
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