Phytophthora sojae: PHYSODRAFT_258381
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Entry
PHYSODRAFT_258381 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K11374
elongator complex protein 2
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psoj03016
]
PHYSODRAFT_258381
Transfer RNA biogenesis [BR:
psoj03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
PHYSODRAFT_258381
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Pyocin_S
NBCH_WD40
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
20638970
NCBI-ProteinID:
XP_009517430
JGI:
Physo3_258381
UniProt:
G4YJP3
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MAMVQATLAHVAVGCNAATNALSVRPSSSSTSSRSCNYCGAFAARNVVCLLRSSVDDDTN
SAPMAIAETLKHRDATSDASRLTSVMMQYDAQSESVQVLAGDSDGRVFLWSKVSTSGWQL
QKVTHESQKLPAVTVAAVTPAETHRRRLYFAAFSDGTLAVFGRGKGSEEEEEVKLLSRLE
LGVKSIMETMDALVVKGGEGEVEESVLLATGGVDSKVHLFEVADGSDQLTELLALEGHQG
WIRSVAFKQQEKEDVGNVVAMLASASQDQRIRVWKVTARSRGQGEGASSGEVKDGFLARG
ARTTYTVSFDALLVGHEDWVTSVQWTQLPRDDESEDPCETALLSSSMDNTLIVWTKSADT
RSSWTPSLRVGEMGGNGLLSAGVLPARGGRLNLLSLSFGGQLERWEQQPVPSKLFLPAIS
INGHCAEVTDLSWAPRGDYLVSVSLDQTARVVAPSKTSNDSLPNWFEISRAQVHGYDINC
GCFVLGNRDANDQFVSGADEKILRVFEAPDEVRQLVGQLSPSDKNGGVQANAEKQVRSVQ
HAYLPELSLTNKSATTEESASDSDNGYAKLSSSLSLPVGDTLGRKTLWPEQRKLYGHGNE
LLCVTSSHTGDLIASACKSREERYAAVRLWNTADWSEAQLPLAGHKSSVVQLAFSPNDLY
LLSVSRDRQFCLYERQPNSDGKFALVESVKAHRRIIWSCSWSPDSSLFALGSRDQSFSLW
SRTSGKWGRICDPVAYDAAVTAVAFLPSALSNSGGYLLAVGLETGAIELFTMSKIDEDVA
EVTCSRIDELAWEISPSGAVSRLEWCPAKNEGEFVLAAASSDSSVRVYNLKI
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggtgcaggcgacgttggctcatgtcgccgtgggctgcaacgccgccacgaac
gccctgtccgtgcgtcccagtagctcctcaacttcatctaggtcttgcaactactgcggc
gcgtttgcagccaggaacgtcgtgtgtctgctgcgcagcagcgtcgacgatgacacaaac
tccgccccaatggccattgcggagacgttgaagcatcgggacgcgacctccgacgcctcg
agactcacgagcgtcatgatgcaatacgatgcacaatcggagagcgtgcaggtgctcgcg
ggggactcggacgggcgcgtgttcctctggtccaaggtgtcaacgagcggttggcagctc
cagaaggtcacgcacgagagtcagaagctgccggcggtgacggtggctgccgtgacgcct
gccgagacgcatagacgtcgactctactttgctgcgttctcggacgggacgttggcggtt
ttcggtcggggtaaagggagcgaggaggaggaggaggtgaagctgctgagtcgactggag
cttggcgtcaagagtatcatggagacaatggatgctcttgtggtgaagggaggagaagga
gaagtggaggagagtgtgctgctggcgacgggtggggtggattccaaggttcatttgttt
gaagtagcggacgggagtgatcagttgacggagttgctggcgctggaaggacatcagggg
tggatccgcagtgtcgcgtttaagcaacaggagaaggaagacgtagggaatgtagtggca
atgctcgcgtcagcgtcgcaggatcagcgaattcgtgtatggaaagttactgctcgatcg
agaggtcaaggtgaaggagcttcctctggtgaagttaaagacggattccttgcgcgtggt
gcccgcacgacgtataccgtgagctttgatgcgctactagtcggtcatgaagactgggtc
acgtcggtgcagtggacgcagttaccgcgagatgatgagagtgaagatccttgcgagaca
gcgctgctttcctcgtccatggacaatacgctcattgtgtggacaaagtctgcagacact
cgcagctcgtggaccccgtcccttcgtgttggtgaaatgggcggcaacgggttgctgtcg
gcaggtgtgttacctgcacgtggtggccgtctgaatctcctgtcgctgagctttggcgga
cagttggagcgctgggagcagcagccagtgccatcgaaacttttcctgccagcaatttcg
attaacggccattgcgctgaggtcacggatctttcgtgggcaccgcgtggcgattactta
gtgtcggtttcgctggatcaaaccgctcgcgtcgtggccccgtcaaagacctccaatgac
tcgctaccgaattggttcgagatctctcgggcgcaggttcatggatacgacatcaactgt
ggctgttttgtgcttggaaatcgcgacgcaaacgaccaattcgtcagtggagctgatgaa
aagatcttgcgcgtgttcgaagctccggatgaggtgaggcaactggtgggtcagttgagt
ccctccgacaagaatggcggggtacaagcaaatgcagagaagcaggtccgaagcgtgcaa
catgcgtatctcccagaattaagtttgacgaacaagtcagcgacaacggaggaatctgcc
agcgactcggacaatggctacgcgaagttgagttcctccttgtctttaccagtgggggac
acgctgggtcgcaaaacgttgtggcctgagcagcgaaagctttacggtcatggaaacgag
cttctctgtgtgacgtcgtcccacactggcgatttgatcgcttccgcctgcaagtcgcgt
gaggaacgatatgcagcggtgcgcctatggaatactgcagactggagcgaagcccaactt
ccacttgcgggccacaagagctcagtggtgcagttggccttctccccgaacgacctgtac
ttgctctcagtgtctagagaccgacaattctgtctctacgagcgacagccgaattcagac
gggaagtttgcgctcgtggaaagtgtaaaagctcaccgccgcatcatttggagttgctcg
tggtcgccagactcgtccctcttcgccctcggttctcgtgatcagtcgttctcgctttgg
agccgaaccagcggaaaatggggtcgcatttgtgaccccgtggcgtatgatgctgccgtc
acggctgtggcctttttaccatctgcactgtcaaattctggaggctatctcctggccgtc
ggtctcgaaaccggtgctatcgaactgtttacaatgtcgaagattgatgaggatgttgcc
gaagtgacttgctcgcgcattgatgaactagcgtgggaaatttccccatccggcgctgtc
tcgcgtttagaatggtgcccagctaagaacgagggagaattcgtgttggcagcagcgagc
agtgatagctctgtgcgagtatacaacctaaagatctaa
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integrated database retrieval system