Phytophthora sojae: PHYSODRAFT_261139
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Entry
PHYSODRAFT_261139 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
psoj
Phytophthora sojae
Pathway
psoj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PHYSODRAFT_261139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psoj03400
]
PHYSODRAFT_261139
DNA repair and recombination proteins [BR:
psoj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PHYSODRAFT_261139
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_27
AAA_28
Motif
Other DBs
NCBI-GeneID:
20639251
NCBI-ProteinID:
XP_009517071
JGI:
Physo3_261139
UniProt:
G4YL41
LinkDB
All DBs
Position
Unknown
AA seq
814 aa
AA seq
DB search
MDREREDDDSAPVEALEEAQAEVALQIRNEKHLKQVGVAVRRPRARASCVKGCAGEDTRQ
WELLLFSFSDSSELANLESLLVQLAPSTCYLSAELEQSQAVGDSKKLHALLQTHEVACVY
MKKQLFQDVSGVETNVARLLGASTMAEYKDVLASKLAAGSLACLIDALGVMADADAFGCY
TLQEGNLSSAMQLDSAAVWSLNLLPEPSATTAGATRFGGSVLEILNRGKTPMGRRLLERW
IRQPLLDVNQIETRQSLVQLFVDDSSLRMELLDECMKALPDLGRLAVSLERKKHAKITDL
VSVYDAAVGAIPRVQKLLKETTAGGDEALASLVKEKFAAPLEKVLADLQGYTELVKEVVD
LDSRPNLVVNAKHDKDLQALREEWDGILADIEDEHRNALDTIGGEIKCEKDKVRGFAFRV
VNKKEESRLSKLPYVHICQVLVSGVQFTTTKLKALAADYRRVRGEYEERQAHVLNAAIDV
ASTYVPVLEAATSTLAELDVLLGFAHAACHAGSGYCRPTLEQDGDCIVLTSARHPCVELQ
DSVDFIPNDYNFEREKSRFQLVTGPNMGGKSTYIRQLGTIAVMAQIGSFVPAEVARLPVF
DKLLVRVGAGDLQQRGVSTFMLEMLEASAILHKATERSLVIIDELGRGTSTYDGFGLAWA
ISEYLLSKARSMCLFATHFHELTALKQEHPQGFANKHVTAVASDREITMVYQVRDGPCME
SFGVHVASMAGFPASVIECARRKSQELEGFERAVGSQGTSSKRSAADASLPENGQSPTKK
TALTKVFLSSFVALPLDKLAPAKVIAAVRKLIPQ
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgagcgcgaagacgacgactcggcccccgtcgaggcgctggaggaggcgcag
gcggaggtggcgcttcagatccgcaacgagaagcacctgaagcaggtgggcgtggccgtg
cgccggccgcgcgcgcgcgcgtcgtgcgtcaagggctgcgccggcgaagacaccaggcag
tgggagctgctgctcttcagcttctcggactcgagcgagctggccaacctcgagtcgctg
ctggtgcagctggcgccctccacgtgctacctgtcggcggagctggagcagtcgcaggcc
gtgggggacagcaagaagctgcacgcgctgctgcagacccacgaggtggcctgcgtctac
atgaagaagcagctgttccaggacgtcagcggcgtcgagaccaacgtggcgaggctgctg
ggcgccagcaccatggccgagtacaaggacgtgctggcgtccaagctggcggccgggagt
ctggcctgcctgatcgacgcgctgggcgtcatggccgacgccgacgccttcggctgctac
acgctgcaagagggcaacctctcgtcggccatgcagctcgacagcgccgccgtctggtcg
ctcaacttgctgccggagccgagcgccaccaccgctggcgcgaccaggttcggcggcagc
gtgctggagatcttgaaccgaggcaagacgcccatgggccgccgtctgctggaacgctgg
atccgccagcctctgctggacgtcaaccagatcgagacgaggcagagtctcgtgcagctc
tttgtggacgattcgtcactgaggatggagctgctggacgagtgcatgaaagcgctgccg
gacttgggacgactggcggtcagtctggagcgcaagaagcacgctaagatcacggacttg
gttagtgtgtacgacgctgccgttggcgctatccctcgggtgcagaagctgttgaaggag
acgactgcaggtggagacgaagcgctggcgagtctggtgaaggagaagttcgcagcccca
ctggaaaaagtccttgccgacttgcaaggatatacggagctggtgaaggaggttgttgac
ctggacagccgcccgaatctcgtggtgaatgcgaagcatgacaaggatcttcaagctctg
cgtgaagaatgggacggaatccttgcggacattgaagatgagcaccgcaacgcacttgac
acgatcggcggtgagatcaagtgcgagaaggacaaagtgcgcgggttcgcgttccgtgtt
gtgaacaaaaaggaggagtctcgattgtccaagttgccgtacgtgcacatctgccaggtg
cttgtgagcggggtgcaatttacgacgacgaagttgaaggcgctggccgccgactaccgt
cgtgtgcgtggtgagtacgaagagcgacaagcccacgtgctgaatgctgcaattgacgtt
gccagcacatacgtacctgtgctcgaggctgcaacgtccactctggcagagctggacgtc
ctcctcggtttcgctcatgctgcgtgccatgctggatcaggatactgtcgccctactcta
gagcaagatggcgattgcatcgtgctgacaagcgcccgccacccgtgcgtggagcttcag
gacagcgttgactttattccgaatgactacaacttcgagcgtgaaaagtcacgatttcag
ctagtcacggggcctaacatgggtggcaagagtacttacatccgtcagttgggcaccatt
gcagtgatggcgcagatcggcagctttgtgcctgcagaagtcgcgcggttgcccgtgttt
gacaaactgttggtgcgtgttggtgctggagatctgcaacagcggggtgtttcaactttc
atgctggaaatgctggaggcgtctgctattctgcacaaggccacagagcgctcgttggtg
attattgatgaactgggtcgtggcacctccacgtacgatggatttgggctggcttgggct
atctcggagtacctactctcgaaggcgcgctccatgtgcttgttcgcaacgcacttccac
gagctgacagcgttgaagcaggagcacccgcagggttttgccaacaaacacgtaacagca
gtggccagcgatcgcgagatcacgatggtgtaccaagtgcgcgatggaccttgtatggaa
agttttggtgtccacgttgcgtccatggcgggctttcctgcgtccgtaattgagtgtgct
cgccgaaagagccaagaacttgagggcttcgagcgtgctgtaggaagccaggggacgtcc
tccaaaaggtctgctgcagacgcctcgctacctgagaatgggcaatccccaaccaagaag
accgcgttgaccaaggtgtttctgtcatcatttgtggctcttccgctagacaaattggcg
ccagcgaaggtgattgccgccgtccgcaagctgattccgcaataa
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