KEGG   Phytophthora sojae: PHYSODRAFT_286529
Entry
PHYSODRAFT_286529 CDS       T03459                                 
Name
(RefSeq) hypothetical protein
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
psoj  Phytophthora sojae
Pathway
psoj03020  RNA polymerase
psoj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psoj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PHYSODRAFT_286529
  09124 Replication and repair
   03420 Nucleotide excision repair
    PHYSODRAFT_286529
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psoj03021]
    PHYSODRAFT_286529
   03400 DNA repair and recombination proteins [BR:psoj03400]
    PHYSODRAFT_286529
Transcription machinery [BR:psoj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     PHYSODRAFT_286529
  RNA polymerase III system
   RNA polymerase III
     PHYSODRAFT_286529
  RNA polymerase I system
   RNA polymerase I
     PHYSODRAFT_286529
DNA repair and recombination proteins [BR:psoj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PHYSODRAFT_286529
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 20640388
NCBI-ProteinID: XP_009530437
JGI: Physo3_286529
UniProt: G4ZSB2
LinkDB
Position
Unknown
AA seq 135 aa
MDDMEYDDAGHAGMEDEEVPEEELEEEVPADDVYEGGDDNGNEEKVQVLDESHKQPNAHR
ITTRYMTKYERARVLGTRALQISMNAPVMVDIEGETDPLKIAMKELRERKIPIIIRRYLP
DNSFEDWSIDELIIE
NT seq 408 nt   +upstreamnt  +downstreamnt
atggacgacatggagtacgacgacgcgggccacgccggtatggaggacgaggaggtcccg
gaggaggagctggaggaggaggtcccggccgacgacgtgtacgagggcggcgacgacaac
ggcaacgaggagaaggtgcaggtgctggacgagtcgcacaagcagcccaacgcgcaccgc
atcaccacgcgctacatgaccaagtacgagcgcgcccgagtgctgggcacgcgcgcgctg
cagatctccatgaacgcaccggtcatggtggacatcgagggcgagacggacccgctcaag
atcgccatgaaggagctgcgcgagcgcaagatccccatcatcatccgccggtacctgccg
gacaactcgttcgaggactggagcatcgacgagctcatcatcgagtag

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