KEGG   Phytophthora sojae: PHYSODRAFT_288446
Entry
PHYSODRAFT_288446 CDS       T03459                                 
Name
(RefSeq) hypothetical protein
  KO
K12828  splicing factor 3B subunit 1
Organism
psoj  Phytophthora sojae
Pathway
psoj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psoj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PHYSODRAFT_288446
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psoj03041]
    PHYSODRAFT_288446
   03036 Chromosome and associated proteins [BR:psoj03036]
    PHYSODRAFT_288446
Spliceosome [BR:psoj03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    PHYSODRAFT_288446
 Complex B
    PHYSODRAFT_288446
 Complex C
   U2 SnRNP specific factors
    PHYSODRAFT_288446
Chromosome and associated proteins [BR:psoj03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    PHYSODRAFT_288446
SSDB
Motif
Pfam: PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ Htt_N-HEAT_1 HEAT_2 HEAT_EF3_N XMAP215_CLASP_TOG IFRD TIP120 DUF2298 UNC45-central Adenylate_cycl
Other DBs
NCBI-GeneID: 20640605
NCBI-ProteinID: XP_009534456
JGI: Physo3_288446
UniProt: G5A4J4
LinkDB
Position
Unknown
AA seq 865 aa
MQATPAREDYGVPVGTPSGGDGSSMPFIKPEDYQYFGKLMDEVNEEDLDPEAAKERKIMR
LLLKIKNGTPPQRKSALRQLTDKAREFGAGALFNQILPLLMAPTLEDQERHLLVKVIDRV
LYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDI
DDEYVRNTTARAFAVVASALGIPALLPFLKAVCQSRKSWQARHTGIKIVQQVAILMGCAV
LPHLKHLVEIIEHGLEDEQKVRTITALALAALAEAAHPYGIESFDSVLRPLWRGTRKHHG
KGLAAFLKAIGFIIPLMDAQYANYYTVEVMEILIREFQSPDEEMKKIVLKVVKQCVSTDG
VEASYVKEKILPEFFRHFWVRRMALDRRNYRQLVETTVELANNVGASEIISRVVDDLKDE
SEPYRRMVMEAIQKIISNLGATDIGTDLEEKLIDGILYAFQEQTSDDTFVMLNGFGIVVN
ALGIRAKNYLPQICGTIKWRLNNKPAKVRMQAADLINRIAVVMKTCDQEPLMGHMGVVLY
EYLGEEYPEVLGSILGALKAIVNVIGMSKMTPPIKDLLPRLTPILKNRHEKVQENCIDLV
GRIADRGADLVSAREWMRICFELLDMLKAHKKGIRRAAVNTFGYIAKAIGPQDVLHTLLN
NLKVQERQNRVCTTVAIAIVAETCSPFTVVPALMNEYRVPELNVQNGVLKAFSFMFEYIG
EMGKDYIYAVAPLLQDALMDRDLVHRQTACTTVKHLALGVVGLGCEDALLHLLNFVWPNI
FETSPHVINAVFEAVEGCRVALGPHVVLQYVLQGLFHPARRVREVYWKIYNSLYMYAQDG
LTPAYPMLEDDGVNSYNRTYLELCI
NT seq 2598 nt   +upstreamnt  +downstreamnt
atgcaggccacgccggcgcgtgaagattacggtgtgcctgttggcaccccgtcgggtggg
gatggtagttccatgccctttatcaagccggaggactaccaatacttcggcaagcttatg
gacgaggtgaacgaggaagacttggatccggaggctgccaaggagcgtaagattatgcgc
ttgttgctgaagatcaagaatggcaccccgccgcagcgaaagagtgcgctgagacagctg
acggataaggcacgcgaatttggtgccggcgcgctattcaaccagatcttgccattgctc
atggcgcccacgctcgaggaccaggagagacacttgctggtgaaggtgatcgaccgtgtg
ctttacaagctggatgatcttgttcgaccgtatgtacacaaaatcctggttgtgatcgaa
ccactgctgattgacgaagattattacgctcgtgtagagggccgcgagattatttcgaac
ctcgccaaggctgctggtcttgctaccatgatttccacgatgcgccccgatatcgatatt
gatgacgagtacgttcgtaacacaactgcccgtgcgtttgcggtcgttgcctcggcgttg
ggtatcccggcattgctgcctttcttgaaggccgtttgccagtcgcgaaagtcctggcaa
gcacgacacacaggtatcaagatcgtgcagcaagtcgctatccttatgggttgtgctgtg
ctaccgcacttgaagcatctcgtggagattattgagcacggcctggaagacgagcaaaag
gtgcgcactatcacagcgcttgctcttgctgctcttgctgaagctgcgcacccgtatggt
attgagtccttcgactctgtgctccgaccactttggcgcggtacccgcaagcaccacggc
aagggcctggcagcatttctgaaggctatcggtttcatcattcctcttatggatgcgcag
tacgcgaactattacactgttgaggtgatggagatcttgattcgtgagttccagtcgcct
gatgaagaaatgaagaaaattgtattgaaggtggtgaagcagtgtgtttctaccgacggt
gttgaggcatcctatgtgaaggaaaagatcctgcccgagttcttccggcatttctgggtt
cgccgcatggcattggaccgacgcaactaccgccagctagtggagacgacagtggaactt
gcaaacaacgttggggcgagcgagatcatctcgcgtgttgtcgatgatctgaaggatgag
agcgagccgtaccgccgtatggtcatggaggcaattcagaagattatctcgaacttgggt
gccacagatattggaaccgatcttgaggagaaactcattgacggtattctttatgctttc
caggagcaaacttcggacgacactttcgtgatgttgaatgggttcggaattgtggtgaac
gcgttgggaattcgtgccaagaactacctgccgcaaatttgcggtactatcaagtggcga
ctaaacaacaaaccggccaaggtccgcatgcaggcagctgatttgatcaatcggattgct
gtggttatgaagacgtgcgaccaggagcctctgatgggtcacatgggtgttgttctgtac
gagtatctcggtgaagagtacccagaggtgcttggtagcattcttggtgcactgaaagcc
atcgtaaatgtgatcggcatgagcaagatgaccccaccgatcaaggatctgcttccgcgc
ctcacgccaattctcaaaaaccgccacgagaaggtccaagaaaactgtatcgaccttgtt
ggacgcattgctgatcgtggtgcggatttggtatcggctcgtgagtggatgcggatttgt
ttcgagctgctggacatgctgaaggctcacaagaagggtatccgacgtgctgcagtcaac
acatttggttacattgccaaggctattggtcctcaggacgtgttgcacactttgctgaac
aacctgaaggtgcaggagcgacagaaccgcgtgtgtacgactgtagccatcgctatcgtc
gccgaaacatgttctccgttcacggtcgtcccagcgctgatgaacgagtaccgtgtcccc
gaattgaacgtgcagaacggtgtgttgaaggcattttcgttcatgttcgagtacatcggc
gaaatgggcaaggactacatctacgcggtggcgccgctgctgcaggacgcactcatggac
cgtgatctggtgcatcgccaaacggcgtgtactaccgtgaagcatctagcgctgggtgtg
gttggattgggttgcgaggacgcgctgctgcacctgctgaatttcgtgtggcccaacatt
ttcgaaacgtctccgcacgtgatcaacgccgtgttcgaagccgtggaaggctgtcgtgtg
gcattgggtccgcacgtggtgctacagtacgtgctgcagggtctgttccacccggcgcgc
cgcgtgcgcgaggtgtactggaagatctacaactcgctctacatgtacgcgcaggacggc
ctgacgcccgcgtacccgatgctggaggacgacggcgtcaactcgtacaaccgcacatac
ctggagctctgcatctaa

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