Phytophthora sojae: PHYSODRAFT_293156
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Entry
PHYSODRAFT_293156 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psoj03016
]
PHYSODRAFT_293156
Enzymes [BR:
psoj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PHYSODRAFT_293156
Transfer RNA biogenesis [BR:
psoj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PHYSODRAFT_293156
Prokaryotic type
PHYSODRAFT_293156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PUS7L_N
Phage_TAC_15
R3H_PUS7L
DUF6179
Motif
Other DBs
NCBI-GeneID:
20640950
NCBI-ProteinID:
XP_009514340
JGI:
Physo3_293156
UniProt:
G4YI54
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MGRGSARYSSRGGGRRGGRGGRGGRGGRGGGRHDGPDFRAAGYNDGTPCSVDESVVGIRR
FLRPEVGGFHGATKQRYSDFVVREVALDGRVVELSDVQRFAPAAKPQKVSEVFKHKVFAL
LNDAANDKMDIPAPVHTLVGKLAGRLLGMFNANKRARALKQEKEDVQRLRAAIADVCGQE
TADKLQDFMFKLIDAQVEEEEAKRLVNNVNKAKAADEKKAEVETKPDEKKEAETAFFFPP
IDAKETRAAVHEVVRKFGSGIVVSDTTTNSDGVSVIRIRRVMVGGKKRKDMDQRGGNNAR
APWPKNRPDYLQFVLYKRNMETNSVMMQLAKAMNSNVANFTYAGTKDKRGITTQLCTVYR
GSKEKLETLNRAGRDLDSFNFLVGNATYVPERLNLGDLRGNRFSLAIRDLPDDETISDEK
IHDAVRSWGEHGFINYFGLQRFGTKAIATHEIGRAILQRDHKRVVELLLSPQEGDATKIR
EARQAFQENQDVGAALKALPPYLIAERAVLQGLRAHGLTAYATAIQSIPRHLRMMYTHAY
QSYVWNTVASERLTEFSREAPVVGDLVIPHDKMTEEYVDDNENGDAGDDEDEAPASKKPR
TSAEASRPDASVTVVTAENLSQYSIYDVVLPLPGYSIMYPENALKQRYEEIMKADGVDFQ
ALERATNSEYHLPGSYRHVLRKPVDVKHELKRFNDPTVPLLETDVDRLAGRAAQASIPDA
KSRALCLEFQLGPSSYATMAVRELLKQSSNLDVQLQLKQKLDAKASK
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgggggtctgcgcgttactcgtctcgcggcggcggacgtcgcggagggcgtggt
ggacgcgggggacgcggcggacggggcggcgggcgccatgacggcccggacttccgcgcc
gcgggctacaacgacggcacgccgtgcagcgtggacgagtccgtggtgggcatccggcgc
ttcctgcggcccgaggtgggcggcttccacggcgccaccaagcagcgctactcggacttc
gtggtgcgcgaggtggcgctggacgggcgcgtggtggagctctcggacgtgcagcgcttc
gcgcccgccgccaagccgcagaaggtgagcgaggtgttcaagcacaaggtcttcgcgctg
ctgaacgacgccgccaacgacaagatggacatccccgcgcccgtgcacacgctggtgggc
aagctggccggccggctgctgggcatgttcaacgccaacaagcgcgcgcgggcgctcaag
caggagaaggaggacgtgcagaggctgcgcgcggccatcgccgacgtctgcgggcaggag
acggccgacaagctgcaggatttcatgttcaagctgatcgacgcgcaggtggaggaggag
gaggccaagcgcctcgtgaacaacgtcaacaaggccaaggcggcggacgagaagaaggcc
gaggtggagaccaagcccgatgagaagaaggaggcggagacggccttcttcttcccgccc
atcgacgccaaggagacgcgcgcggccgtgcacgaggtggtgcgcaagttcggcagcggc
attgtcgtctcggacacgacgacgaatagcgacggcgtgtcggtgatcaggatccgccgc
gtcatggtgggcggcaagaagcgcaaggacatggatcagcgcggcgggaacaatgcgcgc
gcgccgtggcccaagaaccgccccgactacctgcagttcgtgctctacaagcgcaacatg
gagaccaacagcgtcatgatgcagctggccaaggccatgaactcgaacgtggccaacttc
acgtacgccggcaccaaggacaagcgcggcatcacgacgcagctctgcacggtgtaccgc
ggctccaaggagaagctcgagacgctcaaccgcgctggacgcgacctcgactcgttcaac
ttcctcgtaggcaacgccacgtacgtcccggagcgtctgaacctcggagacttgcgcggc
aaccgcttctcgctggccatccgtgacctgccggacgatgaaaccatctcggacgagaag
attcacgacgcagtgcggagctggggcgagcacggcttcatcaactacttcggtctgcag
cgcttcggcaccaaggccatcgccacccacgagatcggccgcgcgatcctgcagcgcgac
cacaagcgcgtggtagagctgctgctgtctccgcaggagggtgatgctaccaagatccgc
gaagcccgtcaagcgttccaggagaaccaggacgttggtgctgcgctgaaggcgctgccc
ccgtatctgatcgctgagcgcgctgtactgcaaggactccgcgcgcacggtctgacagcg
tacgccactgctatccagagcatcccgcgtcacctccgcatgatgtacacgcacgcgtac
cagagctacgtctggaacaccgtcgccagcgagcgcttgaccgagttctccagggaagca
cccgtggtgggagatctcgtgattccgcatgacaagatgaccgaggagtacgttgatgac
aacgagaacggtgacgcgggtgatgacgaggatgaagcccccgctagcaagaagccccgc
acatccgctgaggcctcgcgcccagacgcaagtgttaccgttgtcaccgcggagaacttg
agccagtacagcatctacgacgtcgtcctcccgttgcccggatacagcatcatgtacccg
gagaacgcgctgaagcagcgctatgaagagatcatgaaggctgatggcgtggactttcaa
gctctggagcgcgcgaccaactccgagtatcatctgccaggctcctaccgccacgttctc
aggaaacctgtggatgtgaagcatgagctcaaacgattcaacgacccaacggtgccgctg
ttggaaacggacgtcgaccgtctcgctggccgcgctgcacaagcctccatcccggacgcc
aagtcccgcgccctgtgccttgagttccaattgggcccgtcctcgtacgcgacgatggcg
gttcgtgagctgctcaagcagagcagtaacctcgacgtgcagctccagttgaagcagaag
cttgatgctaaggcgagtaagtaa
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