Phytophthora sojae: PHYSODRAFT_300183
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Entry
PHYSODRAFT_300183 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psoj03019
]
PHYSODRAFT_300183
03036 Chromosome and associated proteins [BR:
psoj03036
]
PHYSODRAFT_300183
Messenger RNA biogenesis [BR:
psoj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
PHYSODRAFT_300183
Chromosome and associated proteins [BR:
psoj03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
PHYSODRAFT_300183
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
PHYSODRAFT_300183
microRNA pathway
RISC loading complex
PHYSODRAFT_300183
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoL2
ArgoL1
ArgoMid
HI0933_like_1st
TERF2_RBM
Motif
Other DBs
NCBI-GeneID:
20641827
NCBI-ProteinID:
XP_009525989
JGI:
Physo3_300183
UniProt:
G4ZE10
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MTDLLQHYSDPEVNVMPVLQALDVVARHVACQRLTVVGRDLYTLKDPHSVHGGKELCWGY
HQAIRKAEDKLVLNLNETSAVFYTPGSLMQLTLSALRAKDPSRIRTLSKLELKNLAHALH
NVEVKPTHREGRARAIYGVSAEPADQLLVNIKGKEQTVAEYFDSKYAKRLKYPRLPCANV
GSKRPGKETWLPIEVCEVVPGQHCANADELDSPSITKLTAIPPAKRERNILDHVKDATFS
NDPYLAAFGMKVMLKMETTNARELEPPCVQYRNTSERPRNAEWRLKDKIMVKGVPFKHWG
VLILDEVDASVVRKFVRMLCDVGRQRGLFIKNNDPVFIHQNDQRTTDVEELVRICYQRVA
ERGPPEMLLVVLPDTRSWLYGPVKVMADTVLGVSCQCVASKNLRKANAAFCANVCLKLNM
RLDGKNAVLRDPLPLLSTSPTIIIGADLEHPRPGMGSQPSIAAVVASMDAYSAQYAARMG
AQKASEDIQKLPNMLRELFHAYYERTKRKPEHVVYYRDGVGDGQYSDILKAEIRALRKAF
KMISDNYSPPITFIVANKRHHTRAFPVDRRDADHKGNVKPGTVVDSGVLDPHRFDFFLYG
HSSLQGTSKPCHYTVLYDENNLSADDIQLLTYHLGYTFSRSTHAVSVAAPVYYANEAAAR
ARHFLKEAPQEEASEIAGSSSGAKFLFAKVHKNVLNKMFFI
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgacggatttactacaacactactccgacccagaggtgaatgtgatgccagtcctgcaa
gctctggacgtggtcgcgcgtcacgtggcgtgccaacgtctcactgtcgtcgggcgcgac
ctgtacacgttgaaggacccgcattcagtgcacgggggcaaggagttgtgctggggatac
caccaagccattcggaaggcggaggacaagctggttctgaatctgaacgagacctctgcg
gtcttttacaccccggggtccctcatgcagttgacgttgagtgcactgcgtgcgaaggac
ccgagcagaattcgcacgttgtcaaagctcgagctgaagaatctcgcgcacgcactgcac
aacgtcgaagtgaagcccacgcaccgtgagggccgcgctcgtgccatctacggcgtcagt
gctgagcctgcagatcaactactggtgaatatcaagggcaaagagcagactgtcgcggag
tacttcgactcgaagtatgccaagcgtctcaagtatccaagactgccgtgcgccaacgta
ggcagcaaacgtccaggcaaagagacctggctgcctatcgaagtgtgcgaggtggtaccg
gggcagcactgcgccaacgcggacgagttggattcgccgtcgatcacgaagttgactgct
attcctcctgcaaagcgtgagaggaacattctggaccatgtgaaggacgccactttctcg
aacgacccgtatctcgcagcgttcggaatgaaagtgatgctgaaaatggagacgacaaat
gcgcgcgagttggagccgccgtgtgtgcagtatcgaaacacttcggagcgtcccaggaac
gctgagtggcgcctcaaggacaaaatcatggtgaagggcgttccgtttaagcattggggc
gtgctgattcttgatgaagtggatgcgtctgttgttcgtaagtttgtgcgcatgctgtgc
gacgttgggcgtcagcgtggactcttcatcaagaacaacgatccggtgttcatccaccag
aatgatcaacgcactacagacgtggaggagttggtgcgcatctgctaccagcgcgtcgca
gagcgtggcccgcccgaaatgctgcttgtggtgctgcctgacactcgttcgtggctgtat
ggaccggttaaggtaatggcggacacggttctgggcgtctcctgtcagtgcgtcgcctcc
aagaacctgcgcaaggcgaacgctgccttctgcgctaatgtctgtttgaagctcaatatg
cgactggatggcaagaacgccgtgctgcgcgacccgcttccactgctgagtacgtcaccg
acgatcattattggagcggatctggagcacccgaggcctggcatgggctcgcagccgtcg
atcgcggcagtggttgcgtcgatggacgcctactcggcccagtatgctgcgcggatgggg
gctcaaaaagcgtcggaggacatccagaagctgcccaacatgctgcgcgagttatttcac
gcgtactacgagcgcaccaagcgcaaaccggagcacgtggtgtactaccgagatggtgtg
ggcgacggccagtactctgacatcctgaaggccgagatccgcgctctgcgcaaggcgttc
aagatgatctcggacaactacagcccgccgatcacgttcatcgtggccaacaagcgccac
cacacgcgcgccttccccgtggatcgccgtgatgccgaccacaagggcaacgtgaagccg
ggaacggtggtcgactctggtgtgctggacccgcaccgattcgacttcttcctctacggc
cacagcagcctccaggggacgagcaagccgtgccactacacagtgctgtacgacgagaac
aacctgtcggccgacgatattcaactgctgacgtaccatctcgggtacacgttctcgcgc
tccacccacgcggtgtcggtcgctgctcccgtttactacgcgaatgaggcggcggcgcgc
gcgcgtcactttttgaaggaagccccgcaggaggaggcgtccgagattgcgggcagctcg
agtggggccaagttcctgttcgcaaaggtgcacaagaatgtgctgaacaaaatgtttttc
atttga
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integrated database retrieval system
