Phytophthora sojae: PHYSODRAFT_300810
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Entry
PHYSODRAFT_300810 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K09273
upstream-binding transcription factor
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psoj03000
]
PHYSODRAFT_300810
03021 Transcription machinery [BR:
psoj03021
]
PHYSODRAFT_300810
Transcription factors [BR:
psoj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
PHYSODRAFT_300810
Transcription machinery [BR:
psoj03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
PHYSODRAFT_300810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
HMG_box_5
COX4
LPD11
FTCD_C
LSU
Ccdc124
Motif
Other DBs
NCBI-GeneID:
20641899
NCBI-ProteinID:
XP_009526969
JGI:
Physo3_300810
UniProt:
G4ZEZ9
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
METARSREALAPHKNAYLHFSHARRDELAAENPSWSVQQVSAELGRQWKALSAAERKPWV
ELAQFDKARFHTEAHHHVNQQQSDEQPEQAPPKRKKQSNEPRQPDTAYICFWKSQRPEVV
AANPFLAAPLVSKEVGRQWRALSDDERQVWEDLAAKDKLRFQEEIARMQPTLAATTPDML
SALKTPLKDPFAPKPAKTAFQLFMSHNRESFMLLNMTINEFRAEMSQLWKRLSDADKAEW
HELAKEDQRRYDTEMNAYKPPAYMDLVVQRSHKRMEELRRLAREDSAAPRLPMNAYNCYL
SAKRQELVDRRPGRKNPEIMREIGVTWKALSDDERAVYQRKADEDVERFRAEMEAHIAKK
NEEEAANPLTKRRPRKRKEFDDEEELVEAVQGPVQPVQVKTPTVPRKKRKSGPPRRPKTA
YNLMYMSKRTELLSTYQMSHNECSALCGKLWRQMSEAEREPYKRMAAEDKHRYEAELQVY
NAQQEEANNKTLRDSAGFRHFLEAKRRENEAISSDEAAAIWQEMTEPHQLLWTELARDNK
HKTSVERTAVDVLDTLL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggagacggcacgcagccgcgaggcgcttgcgccgcacaagaacgcgtatctgcacttc
agccacgctcgccgcgacgagttggcagcggagaatccgtcgtggtccgtgcaacaggtt
tcggcggagctcgggaggcagtggaaggcgctgtcggctgccgagcgcaaaccctgggtc
gagctagcgcagttcgacaaggcgcgcttccacactgaagcccaccatcatgtgaaccaa
cagcagtctgatgagcaacctgagcaggccccacccaagcggaagaagcaatccaacgag
ccacgccagccagacacagcctacatttgcttctggaagagccaacgaccagaagtggta
gctgcaaacccgttcctcgcggcgccactcgtgtcaaaagaggtcgggcgccaatggagg
gctctgtcggatgacgagcgccaggtctgggaagacttggccgccaaagacaaactccgc
ttccaagaagaaatcgcgcgcatgcagccgacgctagcagctactactcctgacatgctg
tctgcgctgaaaactccattgaaagacccgttcgctcccaaaccggcgaagacggccttc
cagctctttatgagccacaaccgtgagagcttcatgctactgaatatgacgattaacgag
ttccgtgctgagatgagtcagctctggaagcgtttgagtgacgcggacaaggcggagtgg
cacgaactggctaaagaggaccagcggcggtacgataccgagatgaatgcctacaaaccg
ccggcatacatggacttggtagtccaacgttcacacaaacggatggaagagctcaggcgt
ctggctcgcgaggactcggcagctccccgcttgccgatgaatgcttataactgttatctg
tcggcaaagcggcaggagctggtagatcgccgtcctggtcgtaagaaccccgaaatcatg
cgggaaatcggtgtcacgtggaaggctttaagtgacgacgagcgtgctgtctaccaacgc
aaggctgatgaggatgttgagcgctttcgggcagagatggaagctcatattgcgaagaag
aatgaagaggaggctgccaatcctctaaccaaaagacggccgcgaaagcggaaggagttc
gatgatgaggaggagttggttgaagcagttcaagggcccgttcaacccgttcaggtaaag
acacctactgtgccgcgcaagaagcgcaagtccggacctccgcggcgaccgaagacggcc
tacaacctgatgtacatgtccaagcgcacggagctgctctcaacgtatcagatgtctcac
aacgagtgctcagcactctgtgggaaactgtggcgtcaaatgtcggaggctgagcgagag
ccgtacaagcgtatggctgcagaggacaagcaccgctacgaagctgagctgcaggtgtac
aatgcgcagcaagaggaggccaacaacaagacgctgcgcgactcggcagggtttcgccac
ttcctggaggccaaacgccgggagaacgaggcgatatccagcgacgaggccgctgccatt
tggcaggagatgacagagccgcaccaactgctgtggactgaactcgcgcgcgacaacaag
cacaagaccagcgtcgagaggacagccgtcgacgtgctcgacactctgctctga
DBGET
integrated database retrieval system
