Phytophthora sojae: PHYSODRAFT_302408
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Entry
PHYSODRAFT_302408 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K14309
nuclear pore complex protein Nup93
Organism
psoj
Phytophthora sojae
Pathway
psoj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PHYSODRAFT_302408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psoj03019
]
PHYSODRAFT_302408
Messenger RNA biogenesis [BR:
psoj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PHYSODRAFT_302408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
20642139
NCBI-ProteinID:
XP_009529790
JGI:
Physo3_302408
UniProt:
G4ZMS1
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MASNDVDFRALYQSSLKLTTSLGELGIPRLEKRLEQLDDASRAQAPAGSRKRPAAAGADK
ANFLLAAKGIDAEKLSKELQQFEIAPEFEPETPLGETDLEGYLAHHHEMIVLTAIEDVNR
RTVEATHDRMNRAMIDDFEDAKQRLLEDLGGAKTLGIRNYPRVLEQDEAAGSIFASAARE
KRQALEPASGLGLSGAGFAGQPRFQSTTSSMTPSLHMSQLHVENAMTEEMKQYYSTIKEL
NSSRVPNTRSQFELARHFQRVCSSNVSVSVTGSKWEAVLKCWQLVNGMLAGGDPTHPNAS
KLAEREFAAVREGSDEAQRTLLQHRFAFGARVFLENQFRAFVQETVQKNNLATGGIPDLV
STIRAFVKHLHSSRYTANGSGSGTDVDNIWAIIYYCLRCGGDQEAVNLATSLSGADSPID
ADVVCALRYRAHQKSLYADRNANPLNAFSKQFPAEFDRLVDRYHRLVSSSIDAVPVVNPF
ERCVVNLLCFGNVNASESRVLTTVEDYLWQRLCFIQRVAATSSGPDSTYTITKLSQSIQR
FGPAHFEGGAQPGGGNFTSFLYFEILLITQEFEKAIKYLASKGFLLEAVHFAITLNHFGL
LECTSFSMGEEDETTIDLVRLVRQYIHGFQRANAAEAADYVACISDLAAKKELLAELLLD
TRKFDVLAGFTNNTDGSRTRGLYDHLLKDEPEDEVKELILSAARKAEARGRPHDAFALLK
SAGDIEGVIVLLNSQLSSTLSATRPEREEWFREAKEFAEKWMRFPWVQTIANRHARTAAI
AFQTLLNISIFLEIYEKQQYEDAIAFVDELEVVPTQNSSNLALCVDRFLAFDESVRQNFH
ILLLGYMECLVRDADRPKTQASGELRRAGVAALREKAELLVTFAGMIKFRLPSGTNERLN
RMEAMIY
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaacgacgtggacttccgggcgctgtaccagagctcgctcaagctgacgaca
tcactcggggagctgggcatccctcggctggagaagcgcctggagcagctggacgacgcg
tcgcgcgcgcaggccccggccggcagccgcaagcgcccggccgccgcgggcgccgacaag
gccaacttcctgctggcagccaagggcatcgacgccgagaagctcagcaaggagctgcag
cagttcgagatcgcgcccgagttcgagcccgagacgccgctgggcgagacggacctcgaa
gggtatctggcccaccaccacgagatgatcgtgctcacggccatcgaggacgtcaaccgc
cgcacggtggaggccacccacgaccgcatgaatcgcgccatgatcgacgacttcgaggac
gccaagcagcggctgctggaggacctgggcggcgccaagacgctcggcatccgcaactac
ccgcgcgtgctggagcaggacgaggctgcgggcagcatcttcgcctctgcagctcgtgag
aagcgccaggcgctggagccggcgtcgggtctgggtctcagcggcgcgggcttcgcgggc
cagccgcgcttccagtccacgaccagctccatgacgccgtccctgcatatgtcgcagctg
cacgtggagaacgccatgacggaggagatgaagcagtactactcgaccatcaaggagctc
aacagcagcagggtgcccaacacgcgcagccagttcgaactcgcgcgccacttccagcgc
gtgtgctcttcgaacgtgtccgtctcggtcacgggatccaaatgggaggccgtgctcaag
tgctggcagctggtgaacggcatgctggccggtggagaccctacccatcccaacgcctcc
aagctggcggagcgggagttcgctgccgtgagggagggaagcgacgaggcgcagcgcacg
ctgctccagcaccgcttcgccttcggcgcgcgcgtgtttctcgagaaccagttccgggcc
tttgtgcaggaaacggtgcagaagaacaacctcgctactggcggcattccggacctggtg
tcgacgattcgcgcgttcgtgaagcacctgcacagctcgcgctacactgctaacggcagt
ggcagcggcacggacgtcgacaacatttgggcgattatctactactgcctccgttgcggt
ggcgaccaggaagctgtcaacctcgccaccagcctgtcgggcgcggactcccccattgac
gctgacgttgtgtgtgcgctaagataccgtgcgcaccagaagagcctctacgcggatcgc
aatgccaacccgttgaacgcgttctcgaagcagttccctgctgagtttgaccgtttagtg
gaccgttaccaccgcttggtcagctcctcgatcgacgctgtccctgtcgtgaacccgttc
gagcgctgcgtggtgaacctcctgtgcttcggcaatgtgaatgcgagcgagtcgcgtgtc
ctgactactgtggaagactacctgtggcagcgcctttgcttcatccagcgcgtggccgcg
acaagctcgggcccggacagcacgtacacaattacaaagctctcccagagtatccagagg
tttggaccggcgcacttcgaaggcggagcccagccgggtggaggcaacttcacatcattc
ttgtacttcgaaattctactgatcacgcaggagttcgagaaggcgattaaatacctggca
tccaagggtttcctgctcgaggcggtgcacttcgcgatcacattgaaccacttcggcctt
ctggaatgcacatcgttctcgatgggagaggaggatgagacgacgatcgacctggtgcgc
cttgttcgccagtacatccacggcttccagcgcgccaacgccgcggaggcggccgactac
gtggcttgcatctcggacttggcagcgaagaaagagctgcttgcggagctactgctcgac
acgcgcaagttcgacgtgctggctggattcacaaacaacacagacggctcgcgtacgcgc
ggcctgtacgaccacctgctgaaggacgagcctgaagatgaggtcaaggagctgattctc
tcggctgcacgcaaggccgaggctcgtggtcgcccgcacgatgcgtttgcgttgctgaag
agcgctggtgatatcgagggtgttattgtgctgctcaactcgcagctcagctcgaccctg
tccgctactcggccagagcgcgaggagtggttccgtgaggccaaggagttcgccgagaaa
tggatgcgattcccgtgggtgcagacaatcgcgaaccggcatgcgcgcaccgctgcaatt
gccttccagacgctgctgaacatcagcatcttcctcgagatctacgagaagcagcagtac
gaggacgccatcgcgtttgtcgatgagctggaggttgtgcctacgcagaactctagcaac
ctggcgctctgcgtggaccgcttcctcgccttcgacgagagtgtgcgtcagaacttccac
atcctgctgctcggatacatggagtgccttgtgcgcgatgccgaccgcccgaagacgcaa
gcttcgggtgaattgcggcgtgctggcgtcgctgccctgcgcgaaaaggccgagctcctc
gtcacatttgccggcatgatcaagttccgtctaccgtcgggtaccaacgagcggctgaac
cgcatggaggccatgatctattag
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