KEGG   Phytophthora sojae: PHYSODRAFT_304396
Entry
PHYSODRAFT_304396 CDS       T03459                                 
Name
(RefSeq) hypothetical protein
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
psoj  Phytophthora sojae
Pathway
psoj03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:psoj00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PHYSODRAFT_304396
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:psoj03009]
    PHYSODRAFT_304396
Ribosome biogenesis [BR:psoj03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    PHYSODRAFT_304396
SSDB
Motif
Pfam: Porphobil_deam Utp21 WD40_Prp19 WD40_WDHD1_1st WD40 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Porphobil_deamC ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_LRRK2 WD40_MABP1-WDR62_1st Beta-prop_NWD2_C Beta-prop_WDR11_2nd Beta-prop_Nup120_160 Cytochrom_D1 Beta-prop_DCAF12 Beta-prop_IFT122_1st Beta-prop_KIB1-4 VPS8_N
Other DBs
NCBI-GeneID: 20642411
NCBI-ProteinID: XP_009533299
JGI: Physo3_304396
UniProt: G5A0L8
LinkDB
Position
Unknown
AA seq 1452 aa
MTATETAAAAKTETPKRTIYVSSRKSQLAMAQTNTVIAMLEVKFPALRFVVGQQDTVGDQ
VLDRHLSELGTSTASGLFTKSLEDALLAKTASFAVHSLKDMPTTLPDGLVLAAITKRESP
EDAAVIHPKHKAKGLTTLKQLPEGSVIGTSSLRREALLRQQFPTFEIKTLRGNIQTRLAK
LDGHDDYDAIIVAACGFRRGELGDRIDEILPMDTFGYGVGQGSIGVECRADDEETIEMLK
TITDEKSAQLCKAERSLLYHLEGGCQIAMGVSATLDEDTLTLNSTVLSRDGKESVHESIS
GPRTEAENLGKQLAQRFWDNELARKVLGKTGQKRALTYGDAEAPGDAAAAAEKAASEVRN
AWFQSFRSCSPNDSSGCSFTGVAVRVSASISLGSARLAVHHKAQRLASLKLPVALVTAPY
RARPRQITETMTSDQLTRCQNSRVLQAFRAIGVVADDVPVVWYGMGKSSFATASLGKSFA
VYNCDKLTPVLVSPQLPKRIAALAVFPRKHVTFTACGRQIIVWRRADRWKTLVGHKGAVK
QMITVGTVLFSLDDERNIMIWDLETMKLVDTLSFPIGFTPTAMMHPDTYLNKILIGSEEG
ALQLWNVRKMKCIYEFKGWGSAVTALEQSPAVDVVSIGLADGRLMVHHLQLDERVMDFKQ
EQQSSITAMSFRTDAGASTTPLVVSGSRSGDIAVWNLQTKRLESVIAAAHDGAVVSLQFL
SNEPLLLSSGSDNSIKLWIFDHLNGGTARLLKSREGHRAPPTRIRYYGNNTLATMADGAD
GTCCQILSAGQDRAFRVFHTAREQQSRELSQGPVLKKARRLNVRVEDLKLPPIAQFAAME
TRERDWANVITCHENEIAAYVWRFENRAIGKKVLRQFDPSKRVPSGSAEDLRRKKTQATS
VAISSCGNYALVGSLGGCIFRYNMQSGEARGSFPVSATPKAKIIRSLVLPGTDMSALQDN
DVEKTAGDAHDGPVSAVAVDALNETLVSAGIDGKLKFWGFKKHELRYEIDIGSPISQMEL
HRDSNLLCVACDDQVLRLYDVTTHKLVRRFAGHSHRVTDMTFSSDARWLFSSSADASLRV
WDIPTGKCVDWLRFHKPVTGLAVSPTGEFLATTHVGHVGIFLWANRSFFTEVFLDSEPAE
PVLMDMPVSLNEVDNSDQLGYGTERNPQLSVLSVDEQQSQSSKVEKGEESSEPLDASLIT
LSTAPRAFWQSLFNLELIKKRNKPIEPPKAPEQAPFFLQTARKDDVHPTFVPVAPEAKKE
TKKKEEDEDVAMDGWGVGDDDEAWGDDDGEEPEDDAEVAAPSSRIVKTEGIVTSRCKLAT
LLAKAIKLEEEEDDTVSRFHEVAVYMQSLSASAVDVEMSTLCMGDFDEEGKKLLGRFLDF
LREEMRTRRDFQVLQAYLNRFLKLHEELLVADPALLAQVDELGSLQQQQWQHLQKLLHNN
LCLVQYLSKIQM
NT seq 4359 nt   +upstreamnt  +downstreamnt
atgactgcgactgagactgctgccgcggccaagacggagacgcccaagcgcaccatctac
gtgtcgtcgcgcaagagccagctggccatggcgcagaccaacacggtcatcgccatgctg
gaggtcaagttcccggcgctgcgcttcgtcgtggggcagcaggacacggtgggcgaccag
gtgctggaccgccacctgagcgagctgggcacgagcacggcctcgggcctcttcaccaag
agcctagaggacgcgctgctggccaagaccgccagcttcgccgtgcactcgctcaaggac
atgcccacaacgctgcccgacgggctcgtgctggccgccatcaccaagcgcgagagcccc
gaggacgcggccgtgatccaccccaagcacaaggccaagggcctcaccacgctcaagcag
ctgcccgagggcagcgtcatcggcaccagctcgctgcggcgcgaggcgctgctgcgccag
cagttcccgaccttcgagatcaagacgctgcgcggcaacatccagacgcggctggccaag
ctggacgggcacgacgactacgacgccattattgtggcggcgtgcggcttccggcgcggc
gagctgggcgaccggatcgacgagattctgcccatggacacgttcggctacggcgtcgga
caggggagcatcggcgtcgagtgccgcgcagacgacgaggagacgatcgagatgctcaag
acgatcacagatgaaaagtcggcgcaactctgcaaggccgagcgtagtctgctctaccat
ttggagggaggatgccagatcgcgatgggcgtgagcgcgacgctggatgaggacacgctg
acgttgaactcgacggtgttgtcgcgtgacggcaaggagagcgtccacgaatcgatctct
ggaccgcgcacggaggctgagaacctgggcaagcagctggcgcagcgcttctgggacaac
gagctggcccgcaaggtgctgggcaagaccggccagaagcgcgccctgacgtacggagac
gccgaagcgcccggtgacgccgctgccgccgctgaaaaggctgcctccgaagtacgaaat
gcttggttccagtcatttcggagctgctcgcccaacgactcaagtggctgctccttcact
ggtgttgcggtgcgcgtctcggcgtcaatctccctcggttcggcgcgactcgctgttcac
cataaagcccagcgtctggcgtctctgaagctgccggttgcactcgtcaccgccccgtac
cgcgcgcgccctaggcagataacggaaaccatgaccagcgaccagttgacgcgctgccag
aactcgcgcgtgctgcaggcgttccgcgccatcggcgtggtggccgacgatgtgcccgtt
gtgtggtacggcatgggcaagtccagcttcgccacggcctcgctgggcaagtccttcgcc
gtgtacaactgcgacaagctcacgcccgtgctggtgtcgccccagctgcccaagcgcatc
gcggcgctggcggttttccccaggaagcacgtgacgtttacggcctgcgggcgccagatc
atcgtctggcggcgcgcggaccgctggaagacgctggtgggccacaagggcgccgtcaag
cagatgatcacagtcggcaccgtgctcttctcgctcgacgacgagcgcaacatcatgatc
tgggacctggagacgatgaagctggtggacacgctgagcttcccgattggcttcaccccg
acggccatgatgcacccggacacgtacctgaacaagatcctcattggctcggaggagggc
gcgctgcagctctggaacgtccgcaagatgaagtgcatctacgagttcaagggctggggc
agcgccgttacggccttggagcagagtcctgcggttgacgtggtgagtatcggactggcg
gacggaagactgatggtgcaccacctgcagctggacgagcgcgtcatggacttcaagcag
gagcagcagagcagcatcacggccatgtccttccgcaccgacgcaggcgcgtcgacgacc
ccgttggttgtgtctggatcgaggtcgggagacatcgcggtctggaacctgcagaccaag
cggctcgagtcggtcattgctgctgctcacgacggcgccgtggtgtcgctccagtttttg
agtaacgagccgctgctgctgtcgtccggctccgacaactcaatcaagctctggatcttc
gaccacctgaacggtggcaccgctcgtcttctcaagtcgcgcgagggccaccgcgccccg
cccacgcgtattcgctactacggcaacaacacgctcgctactatggccgacggtgctgac
ggcacgtgctgccagattctgtccgcaggccaagaccgcgccttccgtgtgttccacacg
gcgcgtgagcaacagagcagggagctatcgcaggggcccgttctgaagaaggctcgccgg
ttgaatgtgcgcgtggaagatctgaagctgccgccgatcgcgcagtttgccgccatggag
acgcgcgaacgcgactgggctaacgtcatcacgtgccacgagaacgagatcgctgcttac
gtgtggcgtttcgagaaccgcgccattggtaagaaggtgcttcgccagttcgaccccagc
aagcgtgtgccttcgggcagtgctgaggacctgcgccgcaagaagactcaggctaccagt
gtggccatcagttcgtgcggcaactacgctcttgtgggtagcttgggtggttgcatcttc
cgctacaacatgcaatccggtgaggctcgtggatcattcccagtttcggccactccgaag
gcgaagatcatccgttcgttggtgctgccgggcacggatatgtcggctctgcaggacaat
gacgtcgagaagacggcgggtgatgctcacgacggacctgtcagcgccgtggccgtggat
gccctcaacgagacgctggtttcggctggcattgacggtaagctcaagttctggggtttc
aagaagcacgagctgcgctacgagatcgatatcggctcccctatcagtcagatggagctg
caccgtgacagcaacttgctctgcgtggcgtgcgatgaccaggtgctgcgtctgtacgac
gtgacgactcacaagctcgtccgtcgctttgccggtcactcgcaccgtgtgacggacatg
acgttcagctcggacgctcggtggctgttctcgtcctcggctgatgcctcgctgcgtgtg
tgggatattcctacgggcaagtgcgtggactggctgcgtttccacaagccggtgactggt
ttggcggtgtcccctacgggcgagttcctggccacgacgcacgttgggcacgtcggtatt
ttcctgtgggccaaccgcagcttcttcacggaggtcttcctcgactcggagcctgctgag
cctgttcttatggacatgcccgtgtcgctgaacgaggtcgacaacagcgaccagctcgga
tacggcacggagcggaaccctcagctgtctgttttgagtgtggacgagcagcagtcacag
agcagcaaggtggagaaaggggaagagagctccgagcctctggatgcctccctcatcaca
ctgtctacggcgccgcgtgcgttctggcagtcactgttcaacttggagctcatcaagaag
cgcaacaagcctattgagcctcctaaggcccccgaacaggctccgttcttccttcagacc
gctcgcaaggatgatgtccacccgacgttcgtccccgttgctcccgaggcgaaaaaggag
accaagaagaaggaggaggacgaggatgttgccatggacggctggggcgtcggcgacgac
gacgaggcatggggagacgacgatggcgaggagcccgaggacgacgcagaagttgctgcc
ccgagctctcggatcgtcaagacggaaggcattgtcacttcgcgctgtaagctggccaca
ctgctggcgaaggcgatcaagctggaggaggaggaagacgacacggtctcacgtttccat
gaggtggccgtgtacatgcagtcgctctctgcgtcggcggtggacgttgagatgagcacc
ctgtgcatgggcgacttcgacgaggagggcaagaagctgctgggccggttcctggacttc
ctgcgcgaggagatgcggacgcgccgcgacttccaggtgctgcaggcctatctgaaccgc
ttcctgaagctgcacgaggagctgctggtggcggacccggcgttgctggcgcaggtggac
gagctcggatcattgcagcagcagcagtggcagcacctgcagaagctcctgcacaacaat
ttgtgtctggtgcagtacctcagcaagatccagatgtaa

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