Phytophthora sojae: PHYSODRAFT_304972
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Entry
PHYSODRAFT_304972 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
psoj
Phytophthora sojae
Pathway
psoj03030
DNA replication
psoj03410
Base excision repair
psoj03420
Nucleotide excision repair
psoj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PHYSODRAFT_304972
03410 Base excision repair
PHYSODRAFT_304972
03420 Nucleotide excision repair
PHYSODRAFT_304972
03430 Mismatch repair
PHYSODRAFT_304972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psoj03032
]
PHYSODRAFT_304972
03400 DNA repair and recombination proteins [BR:
psoj03400
]
PHYSODRAFT_304972
DNA replication proteins [BR:
psoj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PHYSODRAFT_304972
DNA repair and recombination proteins [BR:
psoj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PHYSODRAFT_304972
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
AAA_lid_RFC1
RuvB_N
Rad17
nSTAND3
AAA_22
NPHP3_N
NACHT
AAA_16
NTPase_1
AAA_18
AAA_30
AAA_19
NB-ARC
AAA_7
AAA_5
AAA_14
AAA_28
TIP49
AAA_33
RNA_helicase
AAA_17
RsgA_GTPase
IstB_IS21
Mg_chelatase
TsaE
ABC_tran
Motif
Other DBs
NCBI-GeneID:
20642479
NCBI-ProteinID:
XP_009534299
JGI:
Physo3_304972
UniProt:
G5A3T8
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MDIRSFFQKKPPSSSNGAGSKKATTPAKPAKRAEPEPTPPSRPAARRAAKQNVVVLDGSD
EDEEEVASSSKRKAPAKKKAQRVDSDSDLEMEEDEEQVKPKKEPAKLKRLRRAAKDDSDE
DEEMPEVKSKVKKEVKPTVKTEVKTEIKTEVGRASTASADDELEGFVKQEGALKKVPAPC
SGCLDGKTFVFSGVLENLSRDDAVHLVKCCGGSVANSVTRATKYLVIGATLEQGGKITDG
SKYKEAVAKNVRILTQNEFYNLITEAAAAQQAQDLADEKAKIKAEIAGAKTASSKGKQKL
NTSVNDELWTDKYKPQTLDHMIGNIELGRKLKTWLLDWEAMHVKGTKKIPFSTKLSENRG
AKTVLLSGPPGIGKTTIANLVARECGFECTELNASDTRSKKMLQTGLKDVLGTQALQFGV
PSGKSKEKMHLARRVIIMDEVDGMSGGDRGGTAELIQLIKKSKTPIICICNDRQSQKVRS
LANHSFDLRMRRPTKIQIGKRLMEIGLKEGLHIEKNAIEEAADRCGNDIRQLLTQMQRWR
LTTTKITYADMVNPSSQHNKDESLRLNPFSATQQIFQRELSFEARNEAYFVDYDLMPLMI
QENYIQSIMNNRTSSDENLEAAMHASEFISESDLLNTYVRMEQRWDLLTKQAAMNVGACV
YSAGFIGHPEFSKWLGKNSSASKSKRLLSELSVRMRSHASGSREVIRLDYVPYMKEILLK
KLLSGEDVRSARFVLQSKSAESNGLLYQQNIQEVIELLDECEITREDLTESMESFKFPGV
KRHSYSELDTKAKTAFTRMYNKASHKSQAVVESVLGSTTIKKGRGKAAVKDEDDGLPPPS
DAESEHEEEDLDVSKFQKKARGGAKRKAPAAAAKKAPRKAPAKKRRT
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggacatccgctccttcttccagaaaaagcctccgagcagcagtaacggcgccggcagc
aagaaggcgaccaccccggccaagccagccaagcgtgcggagcccgagccgacgcctccg
tcgcgtcctgcagcccgacgcgccgccaagcagaacgtggtggtgctggacggcagcgac
gaggatgaagaagaagtcgccagcagcagcaagcgcaaggctccggccaagaagaaggcg
cagcgcgtggactccgactcggaccttgagatggaggaggacgaggagcaggtgaagccc
aagaaggagccagccaagctcaagagactgcgacgcgcggccaaggacgacagtgacgag
gacgaggagatgcccgaggtcaagtcgaaggtcaagaaggaggtcaagccgacggttaag
accgaagtcaagaccgagatcaagacggaggtcggcagggcctcgactgcgtccgctgac
gatgaattggagggctttgtgaagcaggagggcgcgctgaagaaggtgccggcgccgtgc
tcgggctgtctagacggcaagacgttcgtgttctcgggcgtgctggagaatctgtcgcgg
gacgacgcggtgcacctggtcaaatgctgcggcgggtcggtggccaacagcgtcacgcgc
gcgaccaagtacttggtgatcggcgccacgctggagcagggcggcaagatcacggacgga
tccaagtacaaggaggcggtggccaagaacgtccgcatcctgacccagaacgagttctac
aacttgatcacggaggctgcagccgcgcagcaggcgcaggacctggcagacgagaaggcg
aagatcaaggcggaaattgcaggagccaagaccgcatcgtccaagggcaagcagaagctc
aacacgtcagtgaatgatgagctgtggacggacaagtacaagccgcagacactggaccac
atgatcggcaacattgagctgggcaggaaactgaagacgtggctgctggactgggaggcc
atgcacgtcaaaggcaccaagaagatcccattctcgacaaaactgtcggaaaatcgtgga
gccaagacggtgttgctgtcgggacctcctggtatcggtaagaccaccattgcgaaccta
gttgcgcgcgagtgcggctttgagtgcaccgagctgaacgcaagcgacacccgcagcaag
aaaatgctgcagactgggctcaaggacgtgctgggcacacaggcgctccagtttggcgta
cctagtgggaagtcgaaggagaagatgcacctcgctcgtcgtgtgatcatcatggacgag
gtcgacggtatgtccggcggtgaccgcggtggtacggcggagcttattcagctcatcaaa
aagtcgaagactccaatcatttgcatttgcaatgaccgccagagccaaaaggtgcggtcg
ctggcaaaccactcgttcgacttgcgcatgcgtcgccccacgaagattcaaatcggcaag
cggctgatggagatcggcctgaaggaaggactgcacatcgagaagaacgcgatcgaagag
gccgctgaccgatgcggcaacgacattcgtcagctgctcacgcagatgcagcgatggcgg
ctaaccaccaccaaaatcacctatgcagacatggtgaacccgtcttctcagcacaacaag
gatgagagtttgcggctgaaccccttcagtgcaactcaacagattttccagcgtgagctc
tctttcgaggctaggaacgaggcttatttcgtcgactacgacttgatgcctctgatgatc
caagaaaactacattcagagcatcatgaacaaccggacgtcgtcggacgagaacctcgag
gcggcgatgcacgcctctgagttcatttcggagagcgacttgttgaacacgtatgttcgg
atggagcagcggtgggacttgctcacaaaacaggctgcgatgaacgtcggtgcctgtgtg
tactcggccggcttcattggtcatcctgagttttccaagtggttgggaaagaactcgtcg
gcttccaagtccaagcggttgctaagtgagctatccgtccgaatgcggtcacacgcgtcg
ggctcccgagaagtcattcgcctcgactacgtgccgtacatgaaggagattctgcttaag
aagctgttgtcaggggaggatgtacgttcagctcgctttgtgctgcaaagcaaatcggct
gaatctaatgggttgctctatcaacagaacattcaggaggtgatcgagctgctcgatgag
tgcgagatcacccgcgaagatttaaccgagtccatggaaagcttcaagttccctggcgtg
aagcgccactcctactcagagctcgacaccaaggcgaaaacggccttcacgcgaatgtac
aacaaggcgtcgcacaagtcgcaggcggtggtggagtccgtgctgggttccacgacaatc
aagaaggggcgaggaaaggccgccgtcaaggacgaggatgacggtctgcctccgccgtcc
gatgccgagagcgagcacgaggaggaggacctggatgtcagcaagttccagaagaaagcc
cgcggcggcgcaaagcgcaaggctccagcagctgcggccaagaaggcgccccgcaaggcg
ccggcgaagaagcgccgcacctag
DBGET
integrated database retrieval system
