Phytophthora sojae: PHYSODRAFT_308732
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Entry
PHYSODRAFT_308732 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psoj04812
]
PHYSODRAFT_308732
Cytoskeleton proteins [BR:
psoj04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
PHYSODRAFT_308732
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Katanin_con80
EIF3I
WDR55
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_EIPR1
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_WDR19_1st
eIF2A
Beta-prop_IFT140_2nd
Beta-prop_LRRK2
PEP5_VPS11_N
Beta-prop_NWD2_C
Cytochrom_D1
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
20643064
NCBI-ProteinID:
XP_009514773
JGI:
Physo3_308732
UniProt:
G4YIB5
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MALARHSHFLAHSSNVNCLRFGRKSGQVAATGGDDNMVNLWRMREKETKNIMSLSGHQSA
VESVVFDPAERKVVAGSQAGSIKVFDLEAGKVSRTLKGHMASTTTVDYHLYGDYVASGSR
DTIVKVWDLRTKSCMQTFKGHSSEVTAVSFTPDGRWLTSGDQDGVIKIWDLTAGRLLREF
PDHGGAITSLEFNPEEFILVSSAADRTVRFWDVQEFALIGVTPVDNATTTSMCHTVAEPY
SGKYLFCCSQEAIRVWSYETAIECHDSVMMPRQKDLGYVEMHADTTMTQDMKLMGGCIQD
AFVSVWVLDVMQMRPFNRKNSQSSDQRAAEARSRPPSARAVTPSAPAPVTRPPTATPTEA
LVVAGTRDVSRGSGNGNANFPDNLAPRPVSARQATPIHTEPQQVESPPEAVETPTPSLAQ
QRPEEEFATSDFVMELRCGMDTCVKAFKARQKCVQQLLIHWEKGRLHDGLRYIAELPRGK
REAVVVDVLRITDLQSLGMDLEACVLLLPLIVEVLESKFELYLSVGIDSGQKLFDAFSPI
VKDARDARQYRSRAINLAGEERAQRCNACDAYFQEMQQRVHRLAEICNYSSLQNKVNVFA
RSLGDFYGR
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgcccggcactctcacttcctggcgcactccagcaatgtcaactgcctgcgc
ttcggccgcaagtcgggccaagtggcggcgactggcggagacgacaacatggtgaacctc
tggcggatgcgcgagaaggagaccaagaacatcatgagcctgtcgggccaccagagcgcc
gtcgagagcgtcgtgttcgacccggcggagcgcaaagtggtggccggctcccaggcggga
tccatcaaggtgttcgacctggaggctggcaaagtgagccgcacgctcaagggccacatg
gcctcgaccacgacggtggactaccatttgtacggcgactacgtggcctcgggctcgcgt
gacaccatcgtgaaggtctgggacctgcgcaccaagagctgcatgcagaccttcaagggg
cactcgtcggaggtgacggcggtgagcttcacgcccgatggacgatggctcacgtccggt
gaccaggacggtgtcatcaaaatatgggacctcacggctggacgcctccttcgcgagttt
cctgaccacggcggcgctatcaccagcctcgaatttaaccctgaagagttcatcctggtg
tcctctgctgccgaccgcacggtgcgattctgggacgtgcaggagtttgctctgatcggt
gtcacccccgttgataacgctacgacgacatcgatgtgccacacggtggctgagccgtac
agcgggaagtatttattttgctgttcccaggaagccatccgagtgtggtcatacgagact
gccattgagtgccacgatagtgtgatgatgccgcgccagaaggatctgggctacgtggag
atgcatgccgacaccaccatgacgcaggatatgaaactcatgggcggctgcattcaggac
gcgtttgtctcggtgtgggtgctcgatgtgatgcagatgcgaccatttaatcgcaagaac
agtcaaagcagcgaccaaagagctgcagaagccagaagtcgaccaccgtccgcacgagca
gtaactccatccgctccagctccagtaactcgccctcccaccgctactcccaccgaggca
ctagttgtcgctggtactcgggatgtatctcgggggtctggtaatggcaatgccaacttc
ccggacaatctggcaccacgccctgtaagcgcgagacaagctacgcctattcacacagaa
ccccaacaagtggaaagtccgccagaagcggttgagaccccaacgccttcacttgcacag
cagcggcccgaagaagagttcgcgacctcggatttcgtaatggagcttcgctgtggaatg
gatacgtgcgtcaaggcgttcaaagcccgacaaaagtgcgtgcagcaactactgatccat
tgggaaaaggggcgcttgcacgacggtcttcggtatattgccgagttgccgcgagggaag
cgtgaagcagttgtggtcgacgtgctgcgtatcacggacttgcaatcactcggtatggac
ttggaggcgtgtgtgctgctacttccgctaatcgtggaagttctggaaagcaagttcgaa
ctatatttaagcgttggcatcgactcggggcaaaagctgttcgatgcgttttcccccatt
gtaaaggacgctcgagatgctcggcagtaccgctcgcgtgccatcaacctagcgggcgaa
gaacgggctcaacggtgcaacgcttgcgacgcgtattttcaagaaatgcagcagcgcgtg
caccgcttggctgagatctgcaactactcctcgctccagaacaaggtcaacgtgtttgcc
cgatcacttggcgacttttacgggcgataa
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