Phytophthora sojae: PHYSODRAFT_309075
Help
Entry
PHYSODRAFT_309075 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psoj03041
]
PHYSODRAFT_309075
Spliceosome [BR:
psoj03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
PHYSODRAFT_309075
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
Motif
Other DBs
NCBI-GeneID:
20643102
NCBI-ProteinID:
XP_009515432
JGI:
Physo3_309075
UniProt:
G4YIN3
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MSFSVERLGNGAAFCLRDEATGTTVLLGCGEIKDTSFYSQDDANAEEFEAAATQYRRELK
DLLRRDGGTVDAILVPDYRPGACYMLPYIAEKCSVSWTAPATAAAQEPSQKQPPAIIMTH
GTRAIAPHLLAEYWTGCHGKVKDGGSGLPAPYDVQDIPPAFRRVKAVALKACVTVNENLK
ITAYHSGHVAGGCAFYLEIGVSTVMFANDFNLTGGRVLLPAQIPRLEPNVLITSSSFAVT
VSETQNAMERELVKVILECISSNGKVVIPVYRLGYFHELITILLEHWQQIKDVTGKSAGC
PIFLSDADMEYPSRFLPVLSRTCTPAVQSLLRERPPSPTDLQVFDWKRLQQPGPFVLFTG
PANISQGGSLRAIKAVASDPKNLIVLSEYCTPGTVNYLLYADPERKRVSKRLGVNVECGV
HYQPCGDEVDTKSIVQLVSRVAPRQVILDYLVPDDLAFVKSHMQNQLKIDPTVGSDVLVK
GINPSGRTPIEPAHDIPLRIHKAMFNNPSDVQGMLIAEPKRKLMLVSSGNGARRLKKKKH
SLFFSYSWKKPFEPSPRVKKKSSRPASALSFLLSAAVESADEEEESEQQPQADVDQLQKA
LEVSLTKWIRHLTIEKIDRWLKLRTVGVSVSAEWEVHMEWSYDDEALAGRVLGIAKQVVH
AEYKKQLAK
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgagcttttccgtggagcggctcgggaacggcgccgccttctgcctgcgcgacgaggcc
acgggcacaaccgtactgctcggctgcggggagatcaaagacacgtccttctactcacag
gacgacgcaaacgcggaggagtttgaggccgcagcgacgcagtaccgccgcgaactgaaa
gacctactgaggcgcgatgggggcactgtagacgccatcttggtgccggactaccgccct
ggcgcctgctacatgttgccgtacattgcggagaagtgtagcgtgtcgtggacggccccg
gcgactgcggcggcgcaagagccgagccagaaacagcctccagcgatcattatgacacat
ggtactcgagccatcgcgccgcatctactggctgagtactggactgggtgtcacgggaag
gtgaaagacggaggtagtggactgccagccccgtacgacgttcaggacatccccccggcg
ttcaggagagtcaaggcggttgcattgaaggcctgcgtgactgtgaacgagaacctcaaa
atcacggcgtatcattcgggtcatgtagcgggaggctgtgccttctatctggagattgga
gtgtcgacggtgatgttcgccaatgacttcaacctcacaggtggacgagtgctgctaccg
gcgcagattccgagactggagcctaatgtgcttattacgagcagttcttttgcagtgacg
gtgtcggagacgcagaacgctatggaaagggagctcgtgaaggttatcctggaatgcatc
agctcgaacggcaaagtggtgatccctgtctaccggttgggctacttccatgagctgatc
acgatcctgttggagcattggcaacaaattaaggatgtgacggggaagtctgctgggtgc
ccgatctttttgtcggatgcggatatggagtaccccagtcgcttcctacctgtgctttcg
cgcacgtgcacgcctgcagttcagagccttctccgtgaaaggccacccagcccgaccgac
ttgcaggtattcgattggaagcggctgcaacaaccaggtccgttcgtgctgttcacagga
ccagctaatatttctcaagggggttcgttgcgtgcgatcaaggcagttgcgagcgacccc
aagaacctcatcgtgctatccgagtattgcacaccgggcaccgttaattatttgctgtat
gcggatcccgaacgcaaacgtgtcagtaagcgcttgggggttaacgtggagtgcggagtt
cactaccagccttgtggcgatgaagtggacaccaagagcatcgttcagctcgtgtcacgt
gtagcgccgcgccaggtcattctcgactacttggttccagacgacctagcatttgtcaaa
tcgcatatgcagaaccagttgaagatagacccgactgtcggctcggatgtgttagtaaag
gggatcaatccttctggacgaacacccatcgaaccagctcatgatatcccgcttcgtatc
cacaaggccatgttcaacaacccctccgatgtgcagggtatgctgattgcagaacccaaa
cgcaagctgatgttggtgtcaagcggtaatggcgcgcggcgtttgaagaagaagaaacac
tcgttgttcttctcctactcctggaagaagccatttgagccgtcgcctcgtgtgaagaag
aaaagctcgcgcccggcctctgcgttatcttttcttctgtcagcggcagttgaatcagcc
gacgaagaagaagagagtgagcaacagcctcaagccgatgtggaccaacttcagaaagcc
ttggaggtcagtctgaccaagtggatccgccaccttacgatcgagaagattgatcgctgg
ctgaagcttcgaacggtaggagtgtcagtgtccgccgagtgggaagtccacatggaatgg
tcttacgacgacgaagcactggctggtcgggtgctcggaattgcaaagcaggttgttcac
gctgaatacaagaaacagctagcaaagtaa
DBGET
integrated database retrieval system
