Phytophthora sojae: PHYSODRAFT_309392
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Entry
PHYSODRAFT_309392 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psoj03009
]
PHYSODRAFT_309392
Enzymes [BR:
psoj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PHYSODRAFT_309392
Ribosome biogenesis [BR:
psoj03009
]
Eukaryotic type
Pre-60S particles
Helicases
PHYSODRAFT_309392
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
AAA_22
Phage_XkdX
Motif
Other DBs
NCBI-GeneID:
20643140
NCBI-ProteinID:
XP_009515846
JGI:
Physo3_309392
UniProt:
G4YKJ1
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MRFHDFQPALCPEILAETDALGFEHMTPVQAATLPLFLSNKDVCVDACTGSGKTLAFVLP
IVQLLKTKLADGSITAPRHADVTKLVAMVISPTRELARQIFECAEKFVAHALPSVQLLLF
VGGTSVDEDLSLIRGAVGKCSVVIGTPGRTEDLLNRCVGSSVETREFEMLILDEADTLLD
MGFEVSLNKILEHLPKQRRTGLFSATQTQEVKALARAGLRNPATISVQVANNTQVTPSTL
QNYYCLVGHDQRLSALHNFVHSKKGEKLIVFFSTCGSVDFFARVLEELFKGTKDMPVVAL
HGKMPQKKRTTNYDLFSSLKSGLLVCTDVVARGIDLPDVDWIVQYDPPQDPNFFVHRVGR
TARAGRSGCALSFLSSNEDAYVNFLKIRKVPCEEMTLPLDTMEDVLPKVKSFILEDRDLL
EKGTKAFMAFVRSYKEHQCQFIFRFKELDLGAVARGFCLLQLPKINELRNVRINFEKTDI
KTTDIKFKDKAREKERQKKLAAIAKENEEREKKNAEMREKKRKRPLEEENQKHPRRREKK
KGLHQQIVEEWDELAEEEQLYKKLKKGKITEEEYEMALLGKADDSDDDGDSDGEGKKKPK
WQRAEEKLKERFKKKEQVVKKTAEQKREAAKREERIRKRKKAQHVQRAQQRAQRRARR
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgcggttccacgacttccagccggcgctgtgccccgagatcctggcggagaccgatgcg
ctgggcttcgagcacatgacgcccgtgcaggcggccacgctgccgctgttcctgtccaac
aaggacgtgtgcgtggacgcgtgcacgggcagcggcaagacgctggccttcgtgctgccc
attgtgcagctgctcaagaccaagctggcggacggcagcatcacggcgccgcgccacgcc
gacgtcaccaagctcgtggccatggtcatctcgcccacgcgcgagctggcgcgccagatc
ttcgagtgcgccgagaagttcgtggcccacgcgctgcccagcgtgcagctgctgctgttc
gtgggcggcaccagcgtggacgaggacctgtcgctgatccgtggggccgtgggcaagtgc
tccgtggtcatcggcacgcctggccgaaccgaggacctgctgaaccgctgcgtcggctcc
agcgtcgagacgcgcgagttcgagatgctcatcctggacgaggccgacacgctgctggac
atgggcttcgaagtgagtctgaacaagatcctggagcacctgcccaagcagagacgcacg
ggactgttctcagccacgcagacgcaggaggtgaaggcgctggcgcgtgcgggtctgcga
aacccggcgacgatctcggtccaggtggccaacaacacgcaggtgacgccgtccacgctg
cagaactactactgccttgtgggccacgaccagcgactgtcggcgctgcacaactttgtc
cactctaagaagggcgagaagctcattgtgtttttctcgacgtgcggatccgtggatttc
ttcgcgcgcgtgttggaggagctgttcaagggaaccaaggacatgcccgttgtggctctg
cacggcaaaatgccgcagaagaagcgcacgacgaactatgatctcttctcgtcgctcaag
tcgggactgctcgtgtgcacggacgttgttgcacgcggtattgatctgccggacgtcgac
tggatcgtgcagtatgacccgccgcaggacccgaacttcttcgtgcatcgtgtgggccgt
acggcgcgtgctggacgctctgggtgcgcgttgtcgttcctgtcttcgaacgaggatgcc
tacgtgaacttcctgaagatccgaaaggtgccatgcgaagagatgacgctcccgctcgac
actatggaagacgtgctgcccaaggtgaagtcgttcattttggaagaccgtgacctgcta
gagaagggcaccaaggccttcatggcattcgtgcggtcttacaaagagcaccagtgccag
ttcattttccgattcaaggagcttgatctgggtgccgtggcgcgcggcttttgccttctt
cagctgccgaagattaatgaactgcgtaacgtccgcatcaacttcgagaagactgacatc
aagacgacggacatcaagttcaaggataaggctcgcgaaaaggagcgtcagaagaagctg
gctgccatcgcgaaggagaatgaagaacgtgaaaagaagaacgccgagatgcgtgagaag
aagcgcaagcgtccgctggaagaggagaaccagaagcacccgcgtcgtcgtgagaagaag
aagggtctgcaccagcagattgtcgaagaatgggacgagctggccgaggaggagcagcta
tacaagaaattgaagaagggcaagatcacggaggaggagtacgagatggcactgctcggt
aaggcggacgattcggacgatgatggcgattctgacggcgaaggcaagaagaagccgaag
tggcagcgtgcggaagaaaagctcaaggagcggttcaagaagaaggagcaggtggtgaag
aaaacggcggagcagaagcgcgaggctgccaaacgtgaggagcgtattcgcaagcgcaag
aaagcacaacacgtccaacgtgcacagcaaagagcccagcgtcgtgcccggcgctaa
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