Phytophthora sojae: PHYSODRAFT_309991
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Entry
PHYSODRAFT_309991 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K14861
nucleolar pre-ribosomal-associated protein 1
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psoj03009
]
PHYSODRAFT_309991
Ribosome biogenesis [BR:
psoj03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
PHYSODRAFT_309991
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NopRA1
Npa1
DUF3385
DIL
Motif
Other DBs
NCBI-GeneID:
20643218
NCBI-ProteinID:
XP_009517123
JGI:
Physo3_309991
UniProt:
G4YN53
LinkDB
All DBs
Position
Unknown
AA seq
2046 aa
AA seq
DB search
MALRQLLLAAERDRQPLDGAFLAFARALRLAPPAAVEDDEEAPVQPSQEDAAALRAQFLA
VHAQGELLLRVWPEQHGLGSRWEKRESFAVFLHVAVHLLQHQTQLDAAQAEAFALRVVRE
KAAQLEKLLSWSDKPLIEFCALQLLGCVARVSGAAARELVRLFNFQSAAFVKLATRRWKK
PEVAQDEEGEETLKHAPFQLRAAYVDLVLALTACPDKSVHRFATKEGGVTASLFKSMDGD
SAEMLTMIFERLGELVLHNKEVEHKSKLVVFNATCVHQLLALLQVEDDEGVRDTALGVLK
ALFFDDSALYIVPQKQALRLFLSKSTASSSALPEEEVTTSEQAYALKVIRNAVGTIGVNE
LLRSTQAQTLVMQFLEKYPGFLSEYLAALSFQLEPMPVYRWFCVASLVQKLLSCSLDAVA
NGMPAAKNPDALSSWCSAQSLASRLIAPGNFRKELSRCIQHTNNLVIYSSLGVIEATLKR
YVRLASSMESLGLASEVQSELRFLLPSPEALVSLLLKLCASQERSIALIYVRALTVFRLY
LECLPQAMREVKVDFTKTLAWRYLDGHTDENAETLPAPMQSLIVGEMLRFLLAVDTPRLR
FLFTSGNSGNRSKLQQMLLLYVSTPSEAVQKLAGQVLQRTLLASDIFGQETQHRQGGTGG
RANEEIGFWLESLRHGGGKTCAEFTEQLARAVMSDPLMYVAIGRRVVTDASSPSSSLSPI
TVALVGFLSSRGGAAGKPDLSAYRADLRVVAFAVRILLALVPTSKHPHQLVALIASNDAF
ADTQQEENDETSSDDSNGKKRKRPSGADDIEREDDAYVWLKAHCEALVSGKPVSGNVSTP
KKKARAANSKWYRFGDPDALTGALVVMSPADFTSKWEHIVSNCADIEESFSPVLHYLSAR
GDVDILSLLTSKAQKKQASSSAATETFKKVVPAHIVLQHIMFSIASNDTKKQDLAIAAVS
DLVRRRLRDDQLAATDAARMCEQLLFFLSSSHPGVSDGGYSHLCELLLLLHFNIIASNEC
TVADVVERIFFKLRAVVASTSNKLLWRQLSAVEIVTLRVYSSNAPEADLSLLCDFGGLFQ
RAGVPLVAMLSSRIPPSARLPVLDGLLTRFNVATCNAPHVVLVERTLKSLGNEGESGDSS
KQYFSFSDYKRAKLLTRKLWQLLTSRNSERQMPFYTTGFSVLGHLGGIDASTAVDAIQSS
LVSLVVQSARTPVQCSSKVLRAIVAAIQSGNDAAAFPTMFEQELMKRLRQEKDERVRCAL
VNAVYNVFTRITSPGLRQFAVNLAPVCYERVLLGSQKTHTAELALLKHLARLENDGALPP
AHLLGLLLLLRGDDTNKTVDVSLLLVLVRSFQEKQLSALKIVLPLLTEAREAIKTSGSQS
AFEAFVSLTAALLRLVGNDANGLDYDFVAHFDALVLHKCFTPTLQNTDNSAVRLLIVRVV
SRLTRITGNYTRSLLQTLLNAYSMSLSPFDRSLRVLFEDFEAQGSGLTLVSMGFRFGAFS
TVSPSAEASLSSKRSHNDLVDDSAWLLGGGIEQNRVRATIEYFPLDREVSTEGDAFLLNL
DDELPVENGNDNVELTLADNGEKEAEAYDPAFLLPMLSHFVSSSDLPDGGIVQQGLLGIT
IRAISSDVEKIREYAYGILAHLHEALQATTETSSDFKAGRQVHLLLDVFRRGVEEQLEQV
PSVVTVFLNDALAVLTRPTHVLYPQVNHFLLARPAMDLADVPMFYSLFNSRAPLTFRQER
SWLLHALRRGVRNDDDVALLVRRHVLPMLLSFYSSELADTHTQPLITSILLAALRTPSGG
AYLITKAALVEWLAAQFLRHGAASSSTKSRNDKSSRSMKAASSALLLPLMTLLEQVLQDA
VWDELDPIQQHATALQAANAFASLQVALAGRRAGSKNDRALVTKAALVTELVVRRAGSVC
SVQLLHQAIDVARLPSSFESSSTRAYGCAQMVANNLSQWLLQQRHHEAQKLRFPDWAKLL
RQVASTLVASCTTATLAEQQQARVALEQLKTVLDQVPSLKQLVLSPSTLNKENASTTTSD
YAPALL
NT seq
6141 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcgccagctgctgctggctgccgagcgcgaccgccagccgctggacggcgcg
ttcctagcgttcgcgcgcgcgctgcgcctggcgcctccagctgcagtcgaagacgatgaa
gaagccccagtccagccctcgcaggaagacgcggccgcgctgcgcgcgcagttcctggcc
gtgcacgcgcagggcgagctgctgctgcgcgtgtggcccgagcagcacggcctgggcagc
cgctgggagaagcgcgagagcttcgccgtgttcctgcacgtggccgtgcacctgctgcag
caccagacgcagctggacgccgcccaggccgaggccttcgcgctgcgcgtggtgcgcgag
aaggccgcgcagctcgagaagctgctgagctggagcgacaagccgctcatcgagttctgc
gcgctgcagctgctgggctgcgtggcgcgcgtgagcggcgcggccgcgcgcgagctcgtg
cggctcttcaacttccagagcgcggcgttcgtcaagctggccacacgccgctggaagaag
cccgaggtggcgcaggacgaggagggagaggagacgctcaagcacgcacccttccagctg
cgcgcggcgtacgtggacctggtgctggcgctcacggcgtgcccggacaagagcgtgcac
cgcttcgccaccaaggagggcggcgtcacggcgtcgctgttcaagagcatggacggcgac
tcggccgagatgctgacgatgatcttcgagagactgggcgagctcgtgctgcacaacaag
gaggtggagcacaagagcaagctcgtggtgttcaatgccacgtgcgtgcaccaactgctc
gcgctgctgcaggtggaggacgacgaaggggtgcgcgatacggcgctcggagtgctcaaa
gcgctgttcttcgacgacagcgcgctgtacatcgtgccgcagaagcaggcgctgaggctg
ttcctgtccaagtccacagcgtcgagctcggcgctcccggaggaagaggtgaccacgtcc
gagcaggcgtacgcactcaaggtgatccgaaatgccgtcggaacgatcggcgtgaatgag
ctgctccgcagtactcaggcgcagacgctcgtcatgcagtttctggaaaagtaccccggg
tttctgtccgagtacctggcggcattgtcgtttcagctggagcccatgcccgtgtatcgt
tggttctgcgtggcctcgctagtgcagaagttgctgtcgtgctcactggatgctgtcgcg
aatggaatgcctgcagctaagaacccagacgcgctgtcgtcgtggtgctctgcgcagtct
ctcgcctcgcggctcattgctccgggtaacttccgcaaggagctatctcgctgtatccaa
cacaccaacaacctggttatctattcgtcgttgggcgtgattgaggcgacgctgaagcgc
tacgtgcgcctagcctcatccatggaatcgctgggtcttgcgtcggaagtgcaatctgag
ctgcgcttcctacttccgagcccggaggcgcttgtctcgttgcttctcaaactgtgtgcg
tctcaggagcgaagcatcgcgcttatttacgtgcgtgctctcacagtgttccgcctgtac
cttgagtgcctaccgcaggcgatgcgggaagtgaaggttgattttacgaagactcttgct
tggcgttacttggatggccacactgacgaaaacgcggagaccttgccggcacccatgcag
agcttgatcgtcggtgaaatgctgcggttcctgcttgcagtggatacccctcgtcttcgc
tttctgtttactagcggcaattccggcaatcgctcgaaactgcagcaaatgttgctgttg
tacgtttccactccaagtgaagcggttcagaagcttgcaggacaggttcttcagcgaacc
ttgctggcttcagacatttttggccaggaaacacagcaccggcaaggagggaccggagga
cgcgctaacgaagagattgggttttggctcgagagtttgcggcacggcggaggcaaaact
tgcgctgaatttacggaacagctcgcgcgtgcggtgatgtcggacccgctgatgtatgtt
gctattggaagacgtgtagtcacagatgcatcttcgccatcgtcgtcgttgagcccaatc
actgtggccctggtgggattcttgagttcacgcggtggagctgctggaaagccagacctg
tcagcataccgtgctgacctgcgagttgtggcatttgcggtgcgcattttgcttgcgctg
gtgccaacaagcaagcatccgcaccaacttgtcgccctgattgcaagcaacgatgcgttt
gctgatacgcagcaagaggaaaacgatgagacatccagtgatgactcaaacggcaagaag
cggaagcgaccttctggtgctgatgacatcgagcgcgaggatgatgcgtacgtgtggctt
aaggctcactgtgaggctctggtttccggaaagcctgtttctggcaatgtatccactccg
aagaagaaagcgcgtgcagctaacagcaagtggtaccgctttggtgaccctgatgccctc
acgggggcattagtggtgatgtcgccagcggatttcacttcgaagtgggagcatattgta
agcaactgtgcagacatcgaagaatcattcagcccggtcctccactatttgtcagcacga
ggagatgtggatattctatcgctcctgacttcaaaggctcaaaagaagcaagcgtcttca
tcagccgcaacagagacattcaagaaggttgtacccgcgcatattgtactccagcacatt
atgttcagtattgcgagcaatgataccaagaagcaagatttggcgatcgcagcggtgtcc
gacttggtgagacgtcggcttcgtgatgatcagttggctgcgacggacgcagcgcgtatg
tgcgagcaactgctgttcttcctttcatcaagccaccctggagtttccgacggaggctac
tcgcacctttgtgagctactcctgcttctacatttcaacattattgcctccaatgagtgt
actgttgctgatgtcgtggagcgcattttcttcaaattgcgagcagtggttgccagtact
tcgaacaagttgttatggcgacagctttctgcggtggagatcgttacactgcgagtttac
tctagcaacgcgccagaagcggacctgtcgttgctgtgtgattttggtggtctgtttcaa
cgcgctggtgtcccgctagtggctatgttgtcttcgcgtattcctcccagtgcccgactt
ccagtgctcgatggtttgctgacccggttcaacgtggcaacctgtaatgctcctcatgtg
gtgcttgtcgaacgtaccctgaagtctctaggaaatgagggtgagagtggagactctagc
aagcaatacttttccttctccgactacaagcgagcaaagttgcttacgcgaaagctctgg
cagcttcttaccagcagaaacagcgagcgacagatgccgttctatacgaccggattttca
gtactgggtcaccttggaggtatcgatgcctccacagccgttgacgctattcagagctca
ctggtatcgcttgttgttcaaagcgcacgtacacccgtgcagtgctcgtctaaggtgctt
cgagccattgttgcggcaattcagagtggcaacgacgctgcagcgttcccgacgatgttt
gagcaagaactaatgaagcgccttcgacaggaaaaggatgagcgagtgcggtgtgctttg
gtgaacgcggtttacaatgtgttcacgcggatcacgagcccaggattacgtcagttcgcc
gtaaatttggcccctgtttgctacgagcgtgtgctcttgggctcccagaagactcacacg
gcagagcttgcacttttgaagcatctagcaagattggagaacgatggtgcattgccgccg
gcccacctgctgggactgctgcttttattgcgaggcgatgacaccaacaaaactgtggac
gtaagtttgctgctggtcctagttcggagctttcaagagaagcagttgtctgccttgaaa
attgtgctccctctactgaccgaggcgcgtgaagctatcaaaacaagtggctctcagtct
gctttcgaggcttttgtgagcttgactgcagctctgcttcgtctggttggaaatgacgcg
aatggattggattacgatttcgttgcccattttgatgccctcgtgctacacaagtgcttc
actccaaccctgcagaacactgacaacagtgctgtgcgacttctgattgttcgcgttgtc
tcgcgactcactcgtatcaccggcaactacacgaggtcgttgttgcagacgttgctgaac
gcgtactcaatgtcgctttcacctttcgaccgcagcttgcgggtactctttgaagatttt
gaagcccagggctctggacttacccttgtgagcatgggcttccgctttggtgcattctcg
acagtttcgccgtcagcagaagcttccttgtcgtctaagcgctctcacaacgacctggtt
gatgattcggcctggctccttggtggaggtattgagcaaaaccgtgttcgtgctacgatt
gagtactttccgctggatcgtgaggtttcgaccgagggcgatgcattcctcttgaacctt
gatgacgaacttcctgttgaaaacggtaacgacaacgtcgaactgaccctagcggacaac
ggcgagaaggaggccgaagcttacgatcctgcgttccttctgccgatgctgtcgcacttc
gtctcctcgtcggatttgccggatggtggcattgtgcagcaaggcttgcttggcattacc
atccgcgccatatcttcggacgtcgagaaaatccgtgaatacgcgtacggcatcctagcg
catctgcacgaggctctgcaggctactacggaaacctcaagcgattttaaggcgggacgc
caagtccatctgttactggatgttttccgccgtggcgtcgaggagcagcttgagcaggtt
ccatcagtggttaccgtgttccttaatgacgcgctcgctgtgctgactcggccaacccac
gtgctgtaccctcaagtgaaccatttcctgctggctcgtcctgcgatggacctggctgat
gtcccgatgttttactcgttgttcaacagccgggctccgctgaccttccgccaagagcgc
tcatggctgctgcacgcgcttcgccgtggagtacgcaacgacgacgacgtggcattgctt
gtgcgccgtcacgtgcttccgatgcttttgagtttctactcctccgagctggctgatacc
cacacgcaacctttgatcacgagcattttgctggctgcacttcgtaccccgtcgggtggt
gcatacttgatcaccaaggcagcgttggtggagtggctagccgcgcaattcttgaggcat
ggagctgcctcctcgtccacgaaatcgcgcaatgataaatcgtcgagatcgatgaaggcg
gcttcgtcggcgctgctgcttcctcttatgacactgttggagcaagtcctgcaggatgca
gtttgggatgagcttgacccaatccagcagcatgcgactgctttgcaggcagcaaatgct
ttcgcatcgttgcaggtagctctcgcgggacgccgtgctggttctaagaatgaccgcgca
ttagtgacgaaggctgcgctcgtgactgagctggttgttcgccgtgctggctcggtttgc
tccgtgcagttgctgcaccaggctattgacgtggcacgactgccttcttcgtttgaaagc
tcaagtacacgtgcctatggctgcgctcagatggtggccaacaacctctcccaatggctc
ctgcagcagcgccaccacgaagcgcagaaactccgcttccccgactgggcgaaattgcta
cgtcaggtggcctcgacacttgtcgccagctgcaccacagctacgttggccgagcaacag
caagcgagggtagccctcgaacaactcaagacggttctggaccaggttccgagcctcaag
cagcttgtgctatctccgtcaactctaaacaaggagaacgcatctaccaccacgtcggac
tacgccccagcactgctttaa
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integrated database retrieval system
