Phytophthora sojae: PHYSODRAFT_310315
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Entry
PHYSODRAFT_310315 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
psoj
Phytophthora sojae
Pathway
psoj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PHYSODRAFT_310315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psoj03021
]
PHYSODRAFT_310315
Transcription machinery [BR:
psoj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
PHYSODRAFT_310315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
20643256
NCBI-ProteinID:
XP_009517652
JGI:
Physo3_310315
UniProt:
G4YNH8
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MNRSGRNGRAGAGASAAAASASSSADTETLVLRATPSIKRYNIARFDLPELPRFSACAQP
VMMYREPERVDEEEEKEDEAPMGYNPALRKRRRRRRKDTRTAGWVIEDSEGKNKFNGTFE
GGQSSTYMLLAKNRHNDEFSVMPVEQWFRFKKPLNYRTLTLEEAEEMNNEKKRAVERWLM
KHKLAGEDKPDAAGDTVSAPRVRTGALATASAKPKAEGDDIFGVSETARPRRVARPKARG
EGATGEDGGDFEEKFDDDESDAEIHNDEPQGLESDSDEDEFEVDPEGTGKLTETGQAMKD
LLKRAQNGEMLENNKDKEDNDDGDEDENYTAKDMDVIIKRDLGGNIIRERVTAGGDSGAS
GDTKTGTGAADNASSADANGKTKSGAAGVDSANGKRKADDGRKTEEPPTKIQKPAAPSSS
NKLTEAGVQQELIRYGGRMRTRDLLRKLKKLIVTDNDKALLKDILRTICDVEVDAIDGRL
LVLKSQFR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgttccggccgcaatggtcgcgcgggggcgggcgcctccgccgctgcggcgtcc
gcctcctcctctgcggacacggagacgctggtgctgcgcgcgacgccgtccatcaagcgc
tacaacatcgcgcgcttcgacctgccggagctgccgcgcttcagcgcctgcgcgcagccc
gtcatgatgtaccgcgagccggagcgcgtggacgaggaggaggagaaggaggacgaggcc
cccatgggctacaacccggcgctgcgcaagcgccgccgccgccgccgcaaggacacgcgc
acggccggctgggtcatcgaggacagcgagggcaagaacaagttcaacggcacgttcgag
ggcggccagtcgtccacgtacatgctgctggccaagaaccgccacaacgacgagttcagc
gtcatgcccgtggagcagtggttccgcttcaagaagccgctcaactaccgcacgctcacg
ctcgaggaggccgaggagatgaacaacgagaagaagcgcgcggtcgagcgctggctcatg
aagcacaagctcgcgggcgaggacaagcccgacgccgccggcgacacggtgagcgcgccg
cgcgtgcgcacgggcgcgctggccacggcctccgccaagcccaaggccgagggggacgac
atcttcggcgtcagcgagaccgcgcgtcctcgccgcgtcgcgcgccccaaggcgcgtgga
gagggcgccacgggagaagacggaggagacttcgaggagaagttcgacgacgacgagagc
gacgcggagattcataacgatgaaccgcagggcctcgagtcggactcggacgaagacgag
ttcgaggtggaccccgagggcaccggcaagctcacggagaccggccaagccatgaaggac
ctgctcaagcgcgcgcagaatggagagatgctggagaacaacaaggacaaggaggacaat
gatgatggcgacgaggacgagaactacacggccaaggacatggacgtgatcatcaagcgc
gatcttggtggaaacatcatccgcgagcgcgtcacggccggcggggacagcggcgcctcg
ggcgataccaagactggcaccggtgcagctgataacgcatcttcggctgacgctaacggc
aagacgaagagtggagcggctggtgtcgatagcgctaatggcaagcgcaaggccgacgac
gggcgcaagactgaggagccgccgacgaagattcagaagccggcggctccttcgtcgtcc
aacaagctcacggaggctggcgtgcagcaagagctgatccgttacggcggacgcatgcgc
acgcgtgacctgctgaggaagctgaagaagctgattgtcacggataacgacaaggcgctg
ctcaaggacatcctgcgcaccatttgtgacgttgaagtggatgcgatcgacggtcgcctg
ctggtgctcaagtcgcagttccgttaa
DBGET
integrated database retrieval system
