Phytophthora sojae: PHYSODRAFT_313351
Help
Entry
PHYSODRAFT_313351 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K18716
nucleoporin NUP42
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psoj03019
]
PHYSODRAFT_313351
Messenger RNA biogenesis [BR:
psoj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PHYSODRAFT_313351
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
zf-CCCH_9
zf-CCCH_2
Torus
Motif
Other DBs
NCBI-GeneID:
20643595
NCBI-ProteinID:
XP_009523598
JGI:
Physo3_313351
UniProt:
G4Z4N7
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MGRPGGHVKPCKFFLQGNCRNGNNCRFSHDAFGGGNRNNGNNGNSGGFGSQAQSQSPFGN
SNAFGGNGNSSSSGTQGVAMTESGRALAIEELKNPPMWPLSGFAVAKGLPSVVAGDVSAE
EARWEAYQELKTSGNCLQSTQKLQALAAEQQTQRQRVVSLLENHQSALKLFNGEPLPGSS
GFGGQGGAANPFGGGAAASPFGAASTPAASPFGGASSTPANPFGGGAAAPASSPFGKPAT
PAASPFGGAAAANPFGGGPTTAFGAPSALGGGSASAFGGGGGAAANPFGGGAAAPASSPF
GKPTTPAASPFGASSTTAFGGAASTSAPSSSPFGGGASTTTSAFGGGASISSTTCGGGNS
GSGFSGFGGGAKPTASPFGGAAAAPSSSPFGGGASAAAPASSPFGATSSTAFGGSSGTAA
TAGSSNPFGATSANNASTAFGGSSSGFGTSSGSTTGASNPFGAPAASNTTAPSPFGALAA
PSSSPFGAPATSTSTGSAFGGFGKPAASSSSSGSAFGAPSATTTTAPPPPPPAPAVSGPP
PDARDDAWNAEQFQQAEFTLGMVPTVPPPPQFC
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgggccggccgggtggccacgtcaagccctgcaagttcttcctgcagggcaattgccgc
aacggcaacaactgccgcttctcgcacgacgcgttcggcggagggaaccgcaacaatggg
aacaacggcaacagcggcggcttcgggtctcaggcgcagtcccagtctccgttcgggaac
tcgaacgcattcggcggcaatgggaacagctcgtcttcgggcactcagggcgtggctatg
acggagtccgggcgggcgctggcaatcgaggagctcaagaacccgcccatgtggccgctg
tcgggcttcgcagtcgctaaaggcctgccgagcgtcgtggcaggcgacgtgagtgctgag
gaggctcggtgggaagcgtatcaagagctcaagacctcgggaaactgcctgcagtccaca
cagaagctgcaggcgctggcagcggagcagcagacgcagcgacagcgggtggtctcgctg
cttgagaaccaccagtcggcgctgaagctgttcaacggagagccgctgcccgggagctca
ggttttggcggccagggcggcgcggccaacccgttcggcggaggtgctgccgctagtcct
tttggggcggccagtacacctgctgcgtcgccgtttggtggcgcctcctcgactcctgct
aacccgtttggaggtggcgctgctgcgcctgcgtcttcgccctttgggaaaccagcgaca
cctgctgcaagtccgtttggcggagctgcagcggcgaatccgttcggaggtggaccgacg
acggcatttggagcgccgtcagcgttgggaggaggatcagcctcggcgtttggtggtggt
ggaggtgcggctgctaacccgtttggaggaggagctgccgctcctgcgtcgtcgccgttt
gggaaaccgacaacgcctgccgctagtccttttggagcttcgtcgacgacagcttttgga
ggagcggcttcgacttcggcgccgtcttcgtctccgttcggtggaggtgcttctactacg
acgtcggcgtttggaggtggagcatcgatttcaagtacgacatgtgggggtggcaactcg
ggatcaggattttcaggctttggcggcggagccaaaccgacagcttctccttttggcggt
gctgcagcggcaccttcatcctcgccgtttggtggcggtgcatcagcagcagctcctgcg
tcctcgccgtttggggcaacttcaagtactgccttcggtggctcgtcagggacagcagca
acagcaggcagctccaatcctttcggggcgacatcagcgaacaacgccagcacagctttc
ggtggatcttcatcaggctttggaacgtcgtctggcagtactacgggagcctctaacccg
tttggagcccccgctgcgtctaacactaccgcaccgtctccgtttggagcacttgctgcg
ccgtccagtagtccctttggagctccagcgacatctacgagcacaggcagtgcgtttggt
ggatttgggaagccggctgcgagtagttcatcgtctggttcagcgtttggagcaccttcg
gctacgaccacgacggcaccgccgcccccacctcccgcaccggcagtcagtggcccgccg
cctgatgctcgcgacgatgcatggaatgccgagcaattccagcaagctgagttcacgctg
ggtatggtgccgaccgtgccgcctccgccacagttctgctaa
DBGET
integrated database retrieval system