Phytophthora sojae: PHYSODRAFT_314356
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Entry
PHYSODRAFT_314356 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K11883
RNA-binding protein NOB1
Organism
psoj
Phytophthora sojae
Pathway
psoj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PHYSODRAFT_314356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psoj03009
]
PHYSODRAFT_314356
03051 Proteasome [BR:
psoj03051
]
PHYSODRAFT_314356
Ribosome biogenesis [BR:
psoj03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
PHYSODRAFT_314356
Proteasome [BR:
psoj03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
PHYSODRAFT_314356
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
zf-CCCH_4
zf-CCCH_9
zf-CCCH_2
Su_sable_N
zf-CCCH
zf-CCCH_DUS3L
zf_CCCH_4
zf-CCCH_3
zf-CCCH_11
Motif
Other DBs
NCBI-GeneID:
20643714
NCBI-ProteinID:
XP_009525700
JGI:
Physo3_314356
UniProt:
G4ZFV8
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MADQEQVQQVSAALEAAQLSDAKPAFSYAAAAAAPAAPAPAKTTNKKVLHLVIDSGAIIK
GTNLAVLAENFWTVPDVLDEIRDKKSRAILERLPFTLQTREPSAEAMKAVVNFSRKTGDF
TYLSLTDLRVMALSYQLEVEANGADHLRTSPELSQTVTRAANGKIVGGSQTNIPCKYFGT
AMGCKYGDECRFTHDEAAVKAVEGGEEPPKKKVDIPCRFFNTPLGCKYGDDCSFIHEKTE
EAEETPAEETQEPVVEQVISEEIRNADVKSRIMGGFAASSNAGAAEDDGKNWITNDNFAK
FTASPFGDGKGLEEIASRLPVACITTDFSMQNVMLQIGLRLLSTEGMIIKRVKQWILRCI
ACFTTSTEMDRLFCPKCGNSTMERVSYSLDRDGHMTFYTRANRPTKLSGTKFSLPKPKGG
RNGDLLLREDQLLVGIWGQRQRQHKKVMQSAFGENVAHDLGVKAERQTGIVVGYGRMNPN
AQKGRERRGKKKRN
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccaggagcaagtgcagcaggtttccgcggcgctggaggccgcgcagctgagc
gacgccaagcccgccttctcttacgcggcggctgcggccgcccccgcggctcccgcgccg
gccaagacgaccaacaagaaggtgctgcacctggtcatcgactctggcgccatcatcaag
ggcaccaacctggcggtgctggccgagaacttctggaccgtgcccgatgtgctggacgag
atccgcgacaagaagtcgcgcgccatcctggagcggctgccgttcacgctgcagacgcgc
gagccgtcggccgaggccatgaaggccgtggtcaacttctcgcgcaagaccggcgacttc
acgtacctgtcgctcacggacctgcgcgtcatggcgctgtcctaccagctggaggtcgag
gccaacggcgccgaccacctgcgcacgagccccgagctctcgcagacggtcacgcgcgcg
gccaacggcaagatcgtgggcggctcgcagaccaacatcccgtgcaagtacttcggcaca
gccatgggctgcaagtacggcgacgagtgccgcttcacgcacgacgaggccgccgtcaag
gccgtggagggtggagaggagccccccaagaagaaggtcgacatcccgtgccgcttcttc
aacacgcccctgggctgcaagtacggcgacgactgctccttcatccacgagaaaacggag
gaggccgaggagacccccgccgaggagacgcaggagcccgtggtggagcaggtcatcagc
gaggagatccgtaacgccgacgtcaagtcccgtatcatgggcgggttcgccgcctcgagc
aacgccggcgccgcggaggacgacggcaagaactggatcaccaacgacaactttgccaag
ttcacggcgtctccgttcggcgacggcaagggcctggaggagatcgcgtcgcgtctgcct
gtggcgtgcatcaccacggatttctccatgcagaacgtgatgctgcagatcggcctgcgc
ctgctgtcgaccgagggcatgatcatcaagcgcgtcaagcagtggatcctgcgctgcatc
gcgtgcttcacgacgtccacggagatggaccgcctgttctgccccaagtgcggcaacagc
accatggagcgcgtgtcgtacagcctcgaccgcgacggccacatgaccttctacacacgg
gcgaaccgccccaccaagctgtcgggcaccaaattctcgctccccaagccgaagggcggc
cgcaacggcgacctgctgctgcgtgaggaccagcttctggtcggcatctggggccagcgt
cagcgccagcacaagaaggtcatgcagagcgcgttcggcgagaacgtagcacacgacctc
ggcgtcaaggccgagcgacagacaggtatcgtggtgggctacggccgcatgaaccccaac
gcgcagaagggccgcgagcgtcgcggcaagaagaagcgcaactag
DBGET
integrated database retrieval system
