KEGG   Phytophthora sojae: PHYSODRAFT_320741
Entry
PHYSODRAFT_320741 CDS       T03459                                 
Name
(RefSeq) hypothetical protein
  KO
K14405  pre-mRNA 3'-end-processing factor FIP1
Organism
psoj  Phytophthora sojae
Pathway
psoj03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:psoj00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    PHYSODRAFT_320741
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psoj03019]
    PHYSODRAFT_320741
Messenger RNA biogenesis [BR:psoj03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     PHYSODRAFT_320741
SSDB
Motif
Pfam: Fip1
Other DBs
NCBI-GeneID: 20644517
NCBI-ProteinID: XP_009514140
JGI: Physo3_320741
UniProt: G4YEF8
LinkDB
Position
Unknown
AA seq 587 aa
MEDEDFGEDVLVTTQRAGVKEEAKTEESRATWEASQGAPVKSEKPKDEHEEDEDEELYGG
VSIKLNASATSQAEAAAASAAAGHGPAGVKAGDDPAADSDDDEDDEDVAIVLSTDHANKP
TLRFTGGGNRYVRGSFGGAQHGGPGAAGSGAAGANQAGELGGSAVDGVDDLAMFGGRRTA
FDVDIDLLEDRPWRKPGVDISDYFNYGFDEHSWREYAARQLRLRRELAVEKSREQASRQA
VSAANQQQAMRERDAKMQGGGMPPRGFPGQMKQEGGDDQNGRPGEWGPGGNGMPPMGGAP
PRGGFMGGPPPRGWHPGMGPPPGFMGQQNWNGPPMGGAPWGSGAEVAAAASMIGGAMTIA
MTGGMVAAGPERRVAIAQDPAIARAERNREAADAAKVLGQMMPTTRIKGATETETAHAAM
NPVAPDVVIAQDPVIARAETNRVAVDVEMVLEAKMLATRIKDATGIETGSVGATVTLAAV
IAMLPVIEDALESAEAVELEEIRRETVEAAIVETEVDARDPESVILASAGVEMKALGVVE
APATSVTNGGIRQQKDSNASITTRLGGAYRDINHLTKTKWQFAVIPW
NT seq 1764 nt   +upstreamnt  +downstreamnt
atggaggacgaggacttcggcgaggatgtgctggtgacgacgcagcgcgccggcgtcaag
gaggaggccaagaccgaggagtcccgcgccacgtgggaggccagtcagggcgcgcccgtc
aagagcgagaagcccaaggacgagcacgaagaggacgaggacgaggagctctacggcggc
gtctccatcaagctcaacgcgtccgccacgtcgcaggcggaagccgccgcagcctccgca
gctgcgggccatggaccggctggcgtcaaggctggcgacgacccggcggccgactcggac
gatgacgaggacgacgaggacgtggccatcgtgctcagcacggaccacgccaacaagccc
acgctgcgcttcacgggcggcggcaatcgctacgtgcgcggcagcttcggcggcgcgcag
catggcggtcctggcgccgctgggtcgggcgctgcgggcgcgaaccaggcgggggaactg
ggcggatccgcggtggacggagtggacgacctcgccatgtttggcggacgacgcacggcg
ttcgacgtggacatcgacctgctggaggacaggccgtggcggaaacccggtgtggatatc
tcggactacttcaattacggcttcgacgagcacagctggagggagtacgcggcgagacag
ctccggttgaggcgcgagctggcggtggagaagtcgagggagcaggcgtccagacaggca
gtgagtgcagctaaccagcagcaggccatgcgagagcgagacgcaaagatgcagggaggt
ggtatgcctccacgtggattccctggacagatgaagcaagagggcggggatgaccagaat
ggccgtcctggagaatggggacctggaggaaatggcatgcctccgatgggtggcgcgccg
cctcgaggcgggttcatgggcggcccgcccccgcgcgggtggcaccctggaatgggcccg
ccgcctggcttcatgggtcagcagaactggaacgggcctccgatgggcggcgcgccgtgg
ggatctggggccgaggtggccgcggcggcttcgatgatcgggggcgcaatgacgatcgcg
atgacaggcggcatggtggcggcaggtccagagaggcgagtcgcgatcgctcaagatccc
gcgatcgcccgcgccgagaggaaccgcgaggcagcggacgccgcgaaggtgctggggcaa
atgatgccaacgacaaggatcaagggcgcgacagagaccgagaccgcccacgccgcgatg
aaccccgtggcgccggacgtcgtgatcgctcaagatcccgtgatcgcccgcgccgagacg
aatcgcgtggcagtggacgtcgagatggtgctggaggcaaagatgctagcgacaaggatc
aaggacgcgacagggatcgagaccgggagcgtgggcgcgaccgtgacgctggcggccgtg
atcgcgatgctgcctgtgatcgaggacgccctcgagagcgcggaggccgtggagctggag
gagatcaggagagagaccgtggaggccgcaatcgtggagaccgaggtggacgctcgcgat
cccgagagcgtgattctcgcaagcgcaggggtcgagatgaaagcgctgggggtagtagag
gccccggcgaccagcgtcacaaacggcggcattagacaacagaaagacagcaacgcatcg
atcaccacgcggctgggcggtgcctaccgagatatcaatcatctaacaaaaacgaaatgg
caatttgcagttataccttggtaa

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