Phytophthora sojae: PHYSODRAFT_323195
Help
Entry
PHYSODRAFT_323195 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psoj03019
]
PHYSODRAFT_323195
03041 Spliceosome [BR:
psoj03041
]
PHYSODRAFT_323195
03036 Chromosome and associated proteins [BR:
psoj03036
]
PHYSODRAFT_323195
Enzymes [BR:
psoj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PHYSODRAFT_323195
Messenger RNA biogenesis [BR:
psoj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
PHYSODRAFT_323195
mRNA cycle factors
Common to processing body (P body) and stress granule
PHYSODRAFT_323195
Spliceosome [BR:
psoj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
PHYSODRAFT_323195
Chromosome and associated proteins [BR:
psoj03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
PHYSODRAFT_323195
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
20644920
NCBI-ProteinID:
XP_009516981
JGI:
Physo3_323195
UniProt:
G4YJA9
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MRGSGGGDRGRGDDDRRGGIEDRRGGYGGGNDRRGGSRERYGSRERSEPRTNSRWAGFES
DRRDDRRGGYGGDDRRGGYGGGYGGGGGGGGGGYGRGGGAARVNEVGYHGDLRPNERLER
ELFGDAKSSGINFDKYDDIPVETSGENVPDPVSEFSATELGPEVIRNLELCKYSKPTPVQ
KYSIPIGLAGRDMMACAQTGSGKTGGFLFPTLAAMLRVGGTPPPEVGHGRSRKIFPSALV
LSPTRELASQIHDEAKKFCYCTGIAPVVIYGGAEVGRQLRELERGCDLLVATPGRLVDLM
ERGRISLACIRFLILDEADRMLDMGFEPQIRRIVEQEDMPRERQTFMFSATFPREIQRLA
SDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQDGLILVFVETKRGA
DFLEDMLCREGFPATSIHGDRSQREREQALASFKSGRTPVLVATDVAARGLDIDGVTQVI
NFDLPNNIDDYVHRIGRTGRVGNVGNALSMMNEKNRNIAREMYELMAENGQEIPAFLDQM
ANSGYRGGGGGRGRSGRGGRGSSRFGARDFRNEERGGGGGGSRGSSGGFGGGYGGGYGGG
GGGYGGGGFSGGGSRGGGSRGGGFSEDNSAW
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggaagcggcggcggtgaccgcggccgtggcgacgacgaccgtcgcggaggcatc
gaggaccgccgcggcggctacggcggcggcaacgaccgtcgcggaggctcgcgcgagcgc
tacggctcccgtgagcgtagcgagccccgcactaactcgcgctgggccggcttcgagtcg
gaccgtcgcgacgaccgccgcgggggctacggcggcgacgaccgtcgtggcggctacggt
ggtggctacggcggaggtggcggaggtggcggcggcggctacggccgtggcggcggcgcc
gcgcgcgtgaacgaggtcggctaccacggcgacctgcgtcccaacgagcgcctggagcgc
gagcttttcggtgacgccaagtcgtccggcatcaacttcgacaagtacgacgacatcccc
gtcgagacgagcggcgagaacgtgcccgacccggtgtcggagttctcggccaccgagttg
ggccccgaggtcatccgcaacctggagctgtgcaagtacagcaagcccacccccgtgcag
aagtactcgatcccgatcggtctggccggccgtgacatgatggcctgtgcccagaccggc
tccggtaagacgggcggtttcctgttccccacgctcgcggccatgctgcgcgtgggcggc
acgcccccgcccgaggtcggccacggccgctcgcgcaagattttcccgtcggcccttgtg
ctgtcccccacgcgtgagctggcgtcgcagatccacgacgaggccaagaagttttgctac
tgcacgggtatcgcccccgtcgtcatctacggtggtgccgaggtcggccgccaactgcgt
gagctggagcgcggttgcgacctgcttgtggctactcctggccgtctcgtcgacctgatg
gagcgtggccgcatctcgctggcgtgcatccgcttcctgattctggatgaggctgaccgc
atgcttgacatgggtttcgagccccagatccgccgcattgtcgagcaggaggacatgccg
cgtgagcgtcagaccttcatgttcagtgccacgttcccgcgtgagatccagcgcctcgcg
tccgacttcctgcgcgactacatttttctgacggtcggccgtgtgggttcggcctcgaag
gatgtgaagcagacggtggagtacattgagcagtacgacaaggaggactacctggtgcgt
ttcctgaaccaggtgcaggacggcctgatcctggtgttcgtcgagacgaagcgtggcgcc
gacttcctggaggacatgctgtgccgcgagggtttcccggccacgtcgatccacggtgac
cgctcgcagcgcgagcgtgagcaggccctggccagcttcaagtcgggccgcacgcccgtg
ctggtggctacggacgtggctgcccgtggtcttgacatcgacggtgtgacccaggtcatc
aactttgacctgcccaacaatatcgacgactacgtgcaccgtatcggtcgtacgggccgt
gtgggtaacgttggcaacgctctctccatgatgaacgagaagaaccgcaacatcgctcgc
gagatgtacgagctgatggctgagaacggtcaggagatccctgcgttcctggaccagatg
gccaacagcggctaccgcggcggaggcggcggtcgtggtcgcagcggccgtggcggccgt
ggcagctcccgcttcggtgctagggacttccgtaacgaggagcgcggcggaggcggcggc
ggctctcgtggcagtagcggcggcttcggaggcggctacggtggcggctacggcggcggc
ggcggtggctacggtggcggcggcttcagcggtggcggcagccgcggcggtggttctcgc
ggcggaggcttcagcgaggacaacagcgcctggtaa
DBGET
integrated database retrieval system
