Phytophthora sojae: PHYSODRAFT_324988
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Entry
PHYSODRAFT_324988 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K13103
tuftelin-interacting protein 11
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psoj03041
]
PHYSODRAFT_324988
Spliceosome [BR:
psoj03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
PHYSODRAFT_324988
Other components
Complex C specific factors
PHYSODRAFT_324988
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
G-patch
G-patch_2
Vps52_CC
Lsm_interact
Motif
Other DBs
NCBI-GeneID:
20645199
NCBI-ProteinID:
XP_009519097
JGI:
Physo3_324988
UniProt:
A1XDC3
G4YWT9
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MASSGGGMSNADFARMFRKEARQEGADQDTSTQPDASSPTSAEPELNPMQAAARRRRQEM
EPETSDAAADEASGGSGIGFGSGTGLGSSSGSGLGFRPSSGSGMGLGADEKKDPAVRPVK
SKTFGWEKHTTGFGTKMLAKMGFKGRLGKKEDGVSATIAVKMRPAQMGIGFGDFVEASNL
KQNRKLQKELKGETVEDEEAAGAAAGAVEDDSLWRKRKVVAGRRKHKRAAELTQEAHDMK
KQKRSDVVLDMRGPSVRVLSDVKAAYDVDPQRVEAAKPKLGDELIYNVRMVVNLAQGKIY
DLTQKIDMNTETVAAMKKEAKMIKAQLNVDDVRLQHMQAMVEQMKALDKLREQVLEEQSV
ELMLSHLRTVRRSFPLEFDAHKLQQLVPSICMPPLRALLMESDLLEQKSGEAVVQQLRLV
QSFLTELPSKKAAKDASASASVLPVIRENTLAEGDDLYNFILEETLWPAMVQCVTVDWKA
KSAPTDCVDAFLRFRPYLSSEFEEAFLNQLVLARLKKECHRWDPRSDTIPIHEWLLPWLP
YLGSAMKSLYPDIRLALASALNQWHPSDLSVFAVLSPWRELWGEREYGKFTHRHIVRKLT
RCLHREFEINPENQSLEALTWVLAWKDHLPDRQFIALLEGEFFPKWLKVLRKWVSGSPNL
IELEKWYCGWKLLFAKNKLATNERLLVHFHGALTLLQVATESVGVPHDSKPPVPELNGSA
AMNYQDALALARDEEVKESPVREAKSSPRSVSRSTVSLKDVIENLAISHNLTFMPKGFHD
GQQVYAFGKHQIIIEQGVVFMEESKGAFKPVDLEQLL
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttccggcgggggcatgagcaacgccgacttcgcgcggatgttccggaaggag
gcgcgtcaggagggcgccgatcaggacactagcacacagccggacgcttcatctcccacc
agcgccgaacccgagttgaatccgatgcaggcggcggctaggagacggcgccaagagatg
gagcccgagacgtccgacgccgccgctgacgaagcttccggcggctctggcatcggtttt
gggtcaggaactggacttggatctagctcagggtctggtctgggcttccgacccagttct
gggtctggaatgggtcttggggccgacgagaagaaggatcccgcggtcagacccgtcaag
agcaagacgttcggctgggagaagcacacgacgggcttcggcaccaagatgctggccaag
atgggcttcaagggccgtctgggcaagaaggaggacggcgtgtcggccactatcgcggtc
aagatgcggcctgcgcagatgggcatcggttttggggacttcgtggaggctagcaacctc
aagcagaaccggaagctgcagaaggagctcaagggggaaactgtggaggacgaggaggcg
gcaggagctgctgcgggtgctgtggaggacgacagtctgtggagaaagaggaaggtggtg
gctggacgcaggaaacacaagcgagcggccgagttgacgcaggaagctcacgatatgaag
aagcagaagagaagcgacgtcgtgctggacatgcgcggaccttctgtccgcgtactatcg
gacgtgaaagcggcctatgacgtcgatccacagcgtgtggaagcggccaagccgaagttg
ggcgatgagctcatttacaatgtgcggatggtggtgaatctagcgcaaggcaagatctac
gacttgacgcagaagattgacatgaacacggagaccgttgctgcgatgaagaaagaggcc
aagatgatcaaggcgcaattgaacgtggatgacgtccggctgcagcatatgcaagccatg
gtggagcaaatgaaagcgctggataagctgcgcgaacaagttctggaggagcaatccgtg
gagcttatgttgtctcacttgcgcactgttcgacggagcttcccgctggaattcgacgct
cacaaactgcagcagttggtgccgtcgatctgcatgcctccgcttcgagccttgctaatg
gagtctgatctactggagcaaaagtcgggtgaggcggttgtccagcagttgcggttggtt
caatcgttcttgacggagctaccgagcaagaaggctgcaaaggatgcaagtgcgtcggct
agcgtactccccgttatccgtgaaaacacattggctgaaggtgatgatctgtacaacttc
atattggaggagacgttatggcctgcaatggtgcagtgcgtgactgtggactggaaggcc
aagtccgctccgaccgattgcgttgatgcattcctgagattcagaccatatctctcgagt
gaatttgaagaggctttcttgaaccagctggtactcgctcgtctgaagaaggagtgccat
cgatgggaccctcgctccgatacgataccgatccacgagtggcttcttccctggctgccc
taccttggatctgcaatgaagtctctgtaccctgatatccggttggccttagctagcgcc
ttgaatcaatggcatccgtcggacctgtcggtgtttgctgttttatctccgtggagagaa
ctttggggtgaacgcgagtacggcaagttcactcatcggcatatcgtgcgaaagttgacc
cgatgtttgcaccgcgagttcgagatcaacccggaaaaccaatctctggaagctctgacg
tgggtgctggcgtggaaagaccatctccctgaccgtcagtttatcgctctgttggaaggc
gagttcttccccaagtggctcaaggtgttgcgcaaatgggtaagcggctcgccaaatctg
atcgagctcgagaaatggtactgtgggtggaagcttctctttgcgaagaacaagctggcg
acgaacgagcgattactggtacattttcatggagctctcacacttctgcaggtcgcaacg
gagtcggttggtgtgccccatgacagcaaaccccctgttcctgagttgaacggcagtgcg
gccatgaactatcaggatgcgttggcacttgcacgagatgaggaggtgaaggagtcaccg
gtccgggaggcaaaatcgtcgcctcggagcgtatctcgcagcactgtcagcttgaaggat
gtcattgaaaatctggcaatcagtcacaacttgactttcatgccaaagggtttccacgac
ggacagcaagtgtacgcgtttggcaagcaccaaattatcatagagcaaggcgtagtgttc
atggaggagtccaagggagcgttcaagcctgtagaccttgagcaactcttgtag
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