Phytophthora sojae: PHYSODRAFT_326004
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Entry
PHYSODRAFT_326004 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
psoj
Phytophthora sojae
Pathway
psoj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PHYSODRAFT_326004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psoj03019
]
PHYSODRAFT_326004
03036 Chromosome and associated proteins [BR:
psoj03036
]
PHYSODRAFT_326004
Messenger RNA biogenesis [BR:
psoj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PHYSODRAFT_326004
Chromosome and associated proteins [BR:
psoj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PHYSODRAFT_326004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
ubiquitin
Nucleoporin_FG
Rad60-SLD
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
20645353
NCBI-ProteinID:
XP_009520239
JGI:
Physo3_326004
UniProt:
G4YW61
LinkDB
All DBs
Position
Unknown
AA seq
2070 aa
AA seq
DB search
MSFGGFGSSSTPASGGFGGFGSGGTSGGFGSSAAASPFGGGATTGGFGSSGTSAFGAGAG
AAKPAFGGFGAAAAPATGGSFGAQQTGTTGFGGFGAAAAPSTGFGAAANPATTSGFGATS
AFGGGATAGGFGSSGTSAFGASTPFGAKPAASPSPFGSTSAFGGGGGAGTTSAFGGGGAT
TGGFGTPAPASGGMFGSTTGGFGASAAKSPFGATSTATTGGFGSQATGTTGFGGFGTQQP
AAGAAAGQVQVGTGQPPYQPTREMEPSGTGGTANYISISRMQAYAHKSTEELRYEDYLKR
TNPAAAQAAATQNAPAPGATTGGTGAFGGFGAQPATSSAFGSTGGFGTGQLSAFGATSTA
GGGFGSSAFGSTTSTTTGGFGGFGSQPAAPATSGGLFGNTAARPATGAFGAPATSSAFGA
APAATSAFGAPATGGAFGSTTGGFGSSFGATPAAQPQTGGFGGFGTTTPAASSGFGSSAF
GKPAASTGFGGFGATTTPAAAPATGGFGFGTAQPQAGATTSLFGGTSTAAPASTGFSFGG
TAPKPATGGFGFGATSGMSAFGSTTGSAFGGTTTPSAFGTTPAQPAAGTTSLFGSTGGTT
GSTGGFGFGTTPAATPGATTSLFGAAKPATTSLFGSTPGSTTTGGLFGSTPAAGGSSLFG
GANTATSTGTTGFGFGTGGGFGSTTTGSFGGFGTTATPAAPTGGFGTTSSLFGQPQQPAQ
AAAAQPLNLVAAPDVNPYGAGSFGAGLVEQNVKAALDLQSIKTGSSASSRLTTFADDVGL
PRGPLDPPLVTRRQTVSNRHAIPVSFIRGSFKGSKSRFSTFTSPAISSSLSSGARTDGNS
KGDSSSKEDEFKFTSSLFRNSVTKKLVIDKGEQTPSRLGASPHVSVVPIADSDRPDVHEI
GSARSRLLKTGDDGKYSVTFCNQTNKKSFSLRLYPNQTVKQARTEVKQLLRESSTSTASP
IVDIELVLKGRIVHDASSIEELQLKDGDSIDVVVIENRTEDKKREDHSSSISSLTKKPEA
HTSEETAPPKRFMTYDEYLASASRDEDDLFKETAANRADRDSPAASSCPVLKNKDYYTIP
SYERLQTMTDQELSQVEKFTVGCRGLGAVEWIGKTDVRDLDLDELVFFEKKEVIVYKDDE
KKHELGKGLNKPAIVELLGIFPPRKSSSPEKYKERVKQRTQDIGATFLDYSTDKGIWRFR
VEHFSRYGFDDDDDDDDVDMDGQNGVADSKELHMDQPPRKPGMTRGHVVGRGKSPFSADR
SGLFRQSWIYGGEVNNNVVASFGEQQVPSADSDKSIAMSDDSGVSGPESDSLMDFNVEEV
VVATKKDQRPTSEVFPVIPYTLKPLGVNSNADRLPPAEKSTTYQMMLQTSNQSQAKVVRN
HVDGGMFMARSFRCSWGPNGELVNLGKLTTRPEVYSNVENKGRRVSIEFPLRLSKSRKTD
LEEGLKLHFEFTSQGRTPNHYVDHDGSEVPVQYALPVHEPLMNCLHKYVANAENRVRKVP
CDSCEKHTLLLWKLIQALWGQEHGAKLGERPDSVFYPLASRDDPNEVETLDTFQTVDLRR
EAISQWFEAAMKDASNAGGIDDSPSPEGVLRLLCQHRIAEAADMALDCGDFRLATLISQA
ASYEGTDFRNLMETQLAQWSENGALDFMDKTLVLVYSVLAGSVEVLSAQKGASMSWIACL
ALFLWYKRGPATSLKSAMTLYEDAVTKKLASDSLSRFATSGSDKDDVLMELMKLYIEDVA
SLCKVLSPSGFMSQESHHLDYELSWHLHSVLRAIGYKLDRQWESHIHQNFIRQLEGAGLW
KDAVYVALNISDATERKNTCRELLFRNADALASNASQREELCERLSLPSEWVSEALAVRA
VVRQERHEEIAQWIAAHRYEEAHACLISHVAMRCLFASEKDVLLQLLLDLEPMCAYIPQW
KSCEKVDAIGGGLILEYLRLEQQKGLEVGHEDQFLQRVMLLSQQLSSARDASAKDASKKS
DKNTLLAQTSVSSMIVSLATQAVQLRSLLSYTQERELTGDASSTSTPLELEPEFLGGLAH
LVTGRESSFVESYRTSQLMHLCSTFIDWRA
NT seq
6213 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcggcgggttcggcagctcgagcacacccgcgagcggcggcttcggaggcttc
ggctcgggcggcaccagcggcggcttcggcagctccgcggccgcgtctccgttcggcggc
ggcgccaccacgggcggcttcggatcttccggcacgtcggcgttcggcgcgggcgcgggc
gcggccaagccggccttcgggggcttcggggccgccgccgcgccggccacaggaggcagc
ttcggcgcgcagcagaccggcacgacgggcttcggcggcttcggagcggccgcggcgccc
tccacgggcttcggcgcggctgcgaaccccgccaccacgtcgggcttcggcgccacgtca
gcgttcggcggcggcgcgactgcaggcggcttcggatcttccggcacgtcggccttcggc
gctagcaccccgttcggcgccaagccggcggcgagccccagtccgttcggatccacgagc
gccttcggcggcggcggcggtgccggtaccaccagcgcgttcggaggaggaggagccacg
acgggcggcttcggcacgccagcgccggccagcggcggcatgttcggcagcacaacgggc
ggcttcggcgcgtcggcggccaagagcccgttcggagcgacgtcgacggccacgaccggc
ggattcggctcgcaggctacgggcaccacgggcttcggcggctttggcacccagcagccg
gcggccggcgccgcggctggacaggtgcaggtcggcacgggccaaccgccgtaccagccc
acgcgcgaaatggagccgtcaggaacgggcggcacggccaactacatctcgatctcgcgc
atgcaggcgtacgcgcacaagtcgacggaggagctgcgctacgaagactacttgaagcgc
acgaacccggcggcagcccaggcggcggctacgcagaacgcgccggcacccggtgcgacc
acgggcggaaccggcgcgttcgggggcttcggcgcccagccggcaaccagttcggctttt
ggatccactggaggattcggcaccggccagctgtcagctttcggtgcaacatccaccgct
ggtggcggctttgggtcgtctgcgtttggctcgaccacttcaacgacaaccggaggattt
ggtggattcggatcgcaaccggcggcgcctgccacgagcggcggcttgtttggaaatact
gctgcccgccccgcgacgggagcgtttggtgcgccagctacgagcagtgcgtttggcgcc
gcgcccgctgctacgtcggcatttggagctcccgctacaggtggtgcatttggatcgacg
acgggcggattcggaagcagctttggtgcgactcctgcggcgcagccacagactggcggc
tttggaggcttcggtacgactaccccagcggcttcctccggctttggctcttctgcgttt
ggcaagcctgcagcgtccaccggctttggaggatttggcgccacgaccacgcctgctgcg
gccccagctacgggaggcttcggatttggaactgcacagccccaggctggcgcgacaacg
tcgctgtttggaggaactagcacggcagcacctgcgtcaactggtttttcgttcggaggt
accgctcccaagcctgctactggaggtttcggcttcggtgccactagcggtatgagcgcg
tttggaagcacgacgggcagtgcatttggaggtactacgacgcccagtgcgtttggcacc
acgcctgcgcaaccggccgccggcacgacctcactctttggctcgacgggtggaacgacc
ggttcaacgggcggctttggatttggcacgactccagccgctacgcctggtgcgaccacc
agtttgtttggagcggctaagcctgcgacaactagcctgtttggatcgacgcctggaagt
acgactacgggagggctattcggtagtactccggcagccggtggatcatctcttttcggg
ggagctaatactgccacgagcacaggaaccactgggttcggcttcggcactggcggcgga
tttggtagcactactactggtagttttggcggctttggaaccactgctacgcctgctgcg
ccaactggaggcttcggcacgacgagtagcctgtttgggcagccacagcaaccggctcag
gcagcagccgcgcaaccactgaacctggtcgcagctcctgatgtgaacccgtacggtgcc
gggtcgttcggtgctggtcttgttgagcaaaacgtgaaggccgcgctggatctccaatcg
atcaaaactggatctagtgcgtcttctcgactcaccacattcgctgatgacgttgggctt
cccaggggcccactggacccacctctcgtgacacgccgtcagacggtcagcaaccgtcac
gccattccggtgtcctttatccgtggctcgttcaagggctcgaagagccgattctcaacg
ttcacgtccccggctatttcgtcttcgctttcaagcggagcccgaacggatgggaattca
aagggcgatagctcttccaaggaagacgagttcaagtttacttcgtcgctgttccgaaac
tcggtcacgaagaagcttgtgattgacaagggagaacaaactccgtctcggctgggagcg
agccctcacgtatccgttgtgccgatcgctgacagtgaccgcccagatgttcacgaaatt
ggaagtgcgcgcagtcggctactgaagaccggtgatgatggcaagtacagcgtcacattc
tgcaaccagacaaacaaaaagtcgttctcgctgcgtctttacccgaaccagactgtgaaa
caagcgagaactgaagtgaagcagttgctgcgtgagagcagtacttcgacggcatccccc
atcgtcgacattgagctggttttgaagggccgcatcgtgcatgacgcaagctccattgaa
gaactgcagctgaaggacggggattccatcgatgttgttgtgattgaaaatcgcaccgag
gacaagaagcgtgaggaccacagctcgtcgatttcttccctgactaagaagcctgaagca
catactagtgaagagacggcgccgcctaagcgcttcatgacgtacgacgagtacttggct
tctgccagtcgcgatgaggacgacttgttcaaggaaactgcagcgaacagagccgatcgt
gactcccctgccgcttcttcttgccctgtgctgaaaaacaaagattactacactatcccc
tcgtatgaacgcttgcagacaatgaccgatcaggaactctcgcaagtggaaaagtttact
gtcggctgccgaggactgggggccgttgagtggatcggtaagacggatgtgcgtgatctt
gaccttgatgagctggtgttctttgagaaaaaagaggtgatcgtctacaaggatgatgag
aagaagcatgaactcggcaagggtctgaacaaacccgctattgtcgagctgctgggaata
ttcccgccgcgcaaatcttcgtcgcccgaaaagtacaaggaacgcgtaaaacagcgcaca
caggatatcggtgccaccttccttgactactctacggataagggtatctggcggttccgt
gtggagcatttcagccgctacggttttgatgatgatgacgacgacgacgacgttgacatg
gacggccagaacggagtggcggacagcaaggagctgcatatggaccagcccccgcgcaag
ccaggcatgacacgaggccatgtagtcggtcgtggaaagagtcccttttcggctgatcga
agtgggctgtttcgtcagtcttggatctacggtggcgaggtgaacaataatgtggttgcg
tcatttggagagcagcaagtccccagcgcggatagcgacaagtcgatcgcgatgtcagac
gactcaggagtgtcgggacctgagtccgactcgctcatggattttaatgtcgaggaggtg
gtggtggccacgaagaaagaccagcgcccaaccagtgaagtgttccctgtcatcccgtac
accttgaagccacttggcgtgaacagcaacgccgatcggttgccacctgcggagaaatct
accacataccaaatgatgttgcagacctctaaccaatcacaagcgaaagtcgtccgaaac
catgtcgacggcggcatgttcatggctcgctcgtttcgctgttcctgggggccaaatggc
gagctcgtgaaccttggaaagctcactacgcgacccgaagtctattcaaatgtggaaaac
aaaggccgtcgtgtcagtatcgagtttcctcttcgtctttccaaatcgcgcaagaccgat
ctcgaagaaggactgaagctacactttgagttcacgtcgcagggacggactccaaaccac
tacgtagatcatgatggatccgaagttccagtacagtatgccctccccgtccacgagccg
ctaatgaactgcttgcacaagtacgttgccaacgctgaaaaccgagttcgaaaggtacca
tgtgattcatgtgaaaagcatacgcttctcctatggaagttgatccaggctctctgggga
caagaacacggtgccaaattgggcgaacgccctgattctgtgttctaccctcttgcgtcg
cgggatgaccccaacgaagtggagacgctggacacttttcagacggtagatctgcgccgt
gaggccatctctcagtggtttgaagctgccatgaaggatgcgagcaacgcgggcggtatt
gacgactctcccagcccggaaggcgtgctccgtcttctgtgtcagcaccggatcgctgaa
gcagcggatatggcgctggactgtggtgactttcgcctcgcgacgctgatttctcaggcc
gcatcttacgaaggaacggattttcgcaatttgatggagacacaacttgcgcagtggagt
gaaaacggagcgctggactttatggacaagactcttgttcttgtctacagtgtgctggca
ggaagcgtggaggttttgtcagctcaaaaaggtgcgagtatgtcgtggatcgcctgctta
gctctgttcttgtggtacaagcgcggcccagccacgtccctgaagtcggccatgacgctt
tacgaggacgctgtcaccaagaagcttgcttctgactcgctttcacgatttgcgacctcg
ggctcagacaaagacgacgttttgatggaattgatgaagctctacatcgaggatgtggct
tcgctgtgcaaagtcctctcgccaagcggctttatgagccaggagtcgcaccacctggac
tacgagttgtcgtggcacctccacagcgttttgcgcgcgatcggctacaagctcgatcgc
cagtgggaatcgcacatccatcagaatttcattcgccaattggagggcgctggcctttgg
aaggatgcagtctatgttgcgctaaatatctcggacgcgacggagcgcaaaaatacctgc
cgcgaacttctgttccgcaacgcggatgcattggcatcgaatgcctctcagcgggaagag
ctgtgtgagcgcttgagccttccttccgaatgggttagcgaagctttggcggtacgagct
gtcgtgaggcaggagcgtcatgaggaaattgctcagtggattgctgcgcaccgctacgaa
gaagcccatgcgtgcctaatctctcacgtcgcgatgcgttgcctctttgccagtgagaaa
gatgttctgctgcagttgctgctggaccttgagcccatgtgtgcgtatattcctcagtgg
aagagctgcgagaaggtggacgccatcggcggcggcctcattctggagtaccttcgtttg
gagcagcaaaaaggccttgaggttggccatgaagaccagttcctgcagcgcgttatgctg
ctctcccagcagctttccagtgcccgggatgcctcggcgaaggatgccagcaagaagtct
gacaagaacacgcttttggcgcaaacttccgtttcgtcgatgatcgtgtccttggcgacg
caggcggttcagctgcgttcgctgctgtcgtacacccaggagcgcgaattgactggcgat
gcctcatcgacctcaacgcctctggagctggagcccgagtttctcggcggactcgcgcac
ctagtcacgggtcgcgagtcttccttcgtggaatcgtaccggacgagccagctgatgcac
ctctgctccacgttcatcgactggcgagcgtaa
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