Phytophthora sojae: PHYSODRAFT_326516
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Entry
PHYSODRAFT_326516 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psoj03009
]
PHYSODRAFT_326516
03036 Chromosome and associated proteins [BR:
psoj03036
]
PHYSODRAFT_326516
Enzymes [BR:
psoj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PHYSODRAFT_326516
Ribosome biogenesis [BR:
psoj03009
]
Eukaryotic type
Pre-60S particles
Helicases
PHYSODRAFT_326516
Chromosome and associated proteins [BR:
psoj03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
PHYSODRAFT_326516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
Ank_4
Ank_5
Ank_2
Ank_3
ResIII
Cas3-like_C_2
AP3D1
Motif
Other DBs
NCBI-GeneID:
20645449
NCBI-ProteinID:
XP_009520796
JGI:
Physo3_326516
UniProt:
G4YVE5
LinkDB
All DBs
Position
Unknown
AA seq
962 aa
AA seq
DB search
MASDEAKPVLMKEERAAKKLAKKAAKLEAEAADVKKEKKVKKEKKDKKEKKSKKRSRDEE
DADDVDATTPEISEESEVETPAAKKAKNENATHVGGTENPPLESFDICAETVKNLKARGI
HTLFPIQAMTFDKILAGKDLMGRARTGMGKTLAFALPVIELLLKDKRPRSRGRAPRVVCM
APTRELAKQVATEFEQSGPSLSTVCIYGGASYQSQNNAFRSGVDILVGTTGRVIDHIDRG
NLRLHNCEFLILDEADTMLEMGFREDVQKVFAAMEQTKNESSGKRQTLLFSATIPKWVTD
VADKYMAKDREYVNLVKDSDDQASTDVQHIAIPCHWQGRPTLLANLLGVYAKKDSRTIIF
AETKKDCNELAVHPEIKTDCQVLHGDIAQEQRETTMKAFREGRLRLLIATDVAARGLDMN
VDLVINSEPPRKMSGMADVDTYVHRSGRTGRAGKKGICITLYTNRQRDQLTQIERKIGNK
FIMKGPPDQEDLIKASAAKALTEINNVDPSMIEIFQEKAAELLGQMDPEKCLAAALACIT
GHTKPPRRTSLMSGVPDYVTVLFTSSNFIRAKGYVWNAVNRDIPENFANDIKQLTLTEDS
MGACFDLPIGALEIVEKLIEEGGMHCPYSIPKTIPKLQQALVEAAEAVALDVASAVAAAA
AVVAAAAAGNLPVLATALLVCRKWLPLDMGSLAHIVDLVDSYLNTFSCNWTVRRACQFGL
PRRALEYLAARDPDWVDGYDIGVLTASGGFVHVLQWILDCYPTRIAWDNGLEGPHRCTLM
NIAAIYGHLPVIQWLHANRSEGCSTNAMDDAAANGHLDVVKEGCTEYAINEAARNGHLGV
LVWFHANRCQGVVHFEDVMDAIAASGHLHVLKWFHDNTSESYSPDAMMRAAAGGHLDVVR
YLHENQPHESSNLRGAVWMAARHGHLGIAEWLYRNRSGGRVGLALRDTAESLEQKVKRQR
LE
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgacgaggcgaagcccgtgctcatgaaggaggagagggcggccaagaagctg
gccaagaaggcagccaagctcgaggccgaggccgcggacgtcaagaaggagaagaaggtc
aagaaggagaagaaggacaagaaggagaagaagagcaagaagcgctcgcgtgacgaggag
gacgcggacgacgtggacgctaccacgcccgagatctcggaggagagcgaggtggagacg
cccgccgccaagaaggccaagaacgagaacgccacccacgtgggcggcaccgagaacccg
ccgctcgagagcttcgacatctgcgccgagaccgtcaagaacctcaaggcgcgcggcatc
cacacgctgttccccatccaggccatgaccttcgacaagatcctggccggcaaggacctc
atgggccgcgcccgcacgggcatgggcaagacgctggccttcgcgctgcccgtgatcgag
ctgctgctcaaggacaagcgcccgcgctcgcgtggccgcgcgccccgcgtggtgtgcatg
gccccgacccgtgagctggccaagcaggtggccaccgagttcgagcagtcgggcccgtcg
ctcagcacggtctgcatctacggtggtgcttcgtaccagtcgcagaacaacgccttccgc
agcggcgtggacatcctggtgggcactactggccgtgtgatcgaccacattgaccgcggc
aacctccgtctgcacaactgcgagttcctgatcctggacgaggccgacacaatgctcgag
atgggcttccgtgaggacgtgcagaaggtcttcgcggccatggagcagaccaagaacgag
agttctggcaagcgccagacgctgctgttctcggccacgatccccaagtgggtcacggac
gtcgctgacaagtacatggcgaaggaccgcgagtacgtcaacctagtgaaggactcggac
gaccaggcttccacggatgtgcagcacattgccatcccgtgccactggcagggacgcccc
acgcttctggccaacctgctcggcgtgtacgccaagaaggactcgcgcacgatcatcttc
gctgagaccaagaaggactgtaacgagctggctgtgcaccccgagatcaagacggactgc
caggtgctgcacggtgacattgcgcaggagcagcgtgagaccaccatgaaggccttccgt
gagggccgtctgcgtctgctgatcgccacggatgttgccgctcgtggtctggacatgaac
gtcgacctcgtcatcaactcggagcctcctcgcaagatgtcgggcatggcggatgtcgac
acgtacgtgcaccgttccgggcgtacgggccgtgctggtaagaagggtatctgtatcacg
ctgtacacgaaccgccagcgcgaccagcttacccagatcgagcgcaagatcggcaacaag
ttcatcatgaaggggccccctgaccaggaggacctgatcaaggcgtctgctgccaaggct
ctgaccgagattaacaacgtggacccgtccatgattgagatcttccaggagaaggcggcc
gagctgctaggacagatggaccccgagaagtgcctggccgctgcgctggcctgcatcacg
ggccacacgaagccgcctcgccgcacgtcgctcatgtctggtgtgcctgactacgtgact
gtgctgttcacgagctccaacttcatccgtgccaagggatacgtctggaacgctgtgaac
cgcgacatccccgagaacttcgcgaacgacatcaagcagttgaccctcacggaagactcg
atgggtgcctgcttcgacctgcctatcggtgctctggagattgtggagaagctcattgag
gagggcggcatgcactgcccgtactcgatcccgaagacgattcccaagctgcagcaagct
ttggtggaggccgcggaggccgtggctctggacgtggcttcagcggtggccgcggcggcc
gcggtcgtggcggcggcggcggccgggaacttgcccgtgctggccaccgctctgctggtg
tgccgcaagtggttgcccctcgacatgggctcgctcgcacacatcgtggatcttgtcgac
agctatttgaacaccttctcatgcaattggaccgtgcgtcgagcgtgtcaatttggacta
ccgagacgtgcacttgaatacctggcagctcgtgatccggactgggtggacggctacgac
attggcgtccttactgcaagtggagggttcgtgcatgtgctacagtggatcctggactgc
tacccaacgcgcatcgcctgggataatggcctcgagggcccccaccgatgtacgctcatg
aacatcgccgccatatatggccacctcccagtcattcagtggcttcatgccaatcgaagc
gaaggctgcagcaccaacgcaatggatgacgctgctgctaacggacacctcgatgtcgtc
aaggaagggtgtaccgagtacgccatcaacgaggccgcgcgcaatggccatttgggggtt
ctggtgtggtttcacgccaatcgatgccaaggcgttgttcatttcgaagatgtcatggat
gctatcgctgcaagtggacatctccacgtactgaagtggttccatgacaacaccagcgag
tcgtactctccagacgcgatgatgcgggcggccgcgggtggccatcttgatgtggttcgc
tacctccacgagaatcagccccacgaaagttccaatctcaggggcgccgtgtggatggcc
gcgaggcatggacacctgggaatcgcggaatggctctaccgaaaccgcagtggaggtcgt
gttggactcgcgctgcgcgataccgccgagtccctggagcaaaaggtcaagcgccagcgg
ctcgagtag
DBGET
integrated database retrieval system
