Phytophthora sojae: PHYSODRAFT_329854
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Entry
PHYSODRAFT_329854 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
psoj
Phytophthora sojae
Pathway
psoj00040
Pentose and glucuronate interconversions
psoj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PHYSODRAFT_329854
Enzymes [BR:
psoj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
PHYSODRAFT_329854
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase
Motif
Other DBs
NCBI-GeneID:
20646004
NCBI-ProteinID:
XP_009524685
JGI:
Physo3_329854
UniProt:
G4ZA83
LinkDB
All DBs
Position
Unknown
AA seq
393 aa
AA seq
DB search
MVKSFATSAALLVAAATAASVPDGTWPTSTGSVHFSEAHIVKAGEVFDGKMQTYERSDVS
CEGQTESGADTAVFKMEPGATLKNVIIGKNQMEGVHCDKHDCTIENVWWDDVCEDALSVK
GGTASSVTTVTGGGARSADDKVIQHNGYGTVKIDGFYGEDISKLYRSCGTCGVKLTAPQV
IKAGEVFDGKMQTFDRSDITCSDGEGQKDTAVFLVEAGGTLKNAIIGKNQKEGVHCDDHD
CTIENVWWDDVCEDALSIKGGSASSVTTVTNCGAKSASDKVVQHNGQGTVNIDGFYAENF
GKLYRSCGTCGDIPRTVTLKNVYAVDPLVSVVTVNKNYGDKATLSNIRVKTSDGNNDVKV
CQWSQGGSTPSNLGDGPSGTLCQYSESDVQINQ
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagtccttcgcgacatccgccgctctgctcgtcgcggccgcaaccgccgcgtcc
gtgcccgacggcacctggcccaccagcaccgggtcggtccacttctccgaggctcacatc
gtcaaggccggcgaggtgttcgacggcaagatgcagacgtacgagcgctccgacgtctcg
tgcgagggccagaccgagagcggcgccgacacggccgtgttcaagatggagcccggcgcc
acgctcaagaacgtcatcatcggcaagaaccaaatggagggcgtccactgcgataagcac
gactgcaccatcgagaacgtctggtgggacgacgtgtgtgaggacgcgctgagtgtcaag
ggcggtaccgcctccagtgtcacgaccgtcacgggcggcggcgctcgctcggccgacgac
aaggtcatccagcacaacggctacggcaccgtcaagatcgacggcttctacggcgaggac
atcagcaagctctaccgctcgtgcggcacgtgcggcgtcaagctcacggcgccgcaagtc
atcaaggccggcgaggtctttgacggcaagatgcagaccttcgaccgctctgacatcacc
tgctccgacggtgagggccagaaggacaccgctgtcttcctcgtggaggctggcggcacc
ctcaagaacgccatcatcggcaagaaccagaaggagggagtgcactgtgacgaccacgac
tgcaccattgagaacgtctggtgggacgacgtgtgcgaggacgcgctaagcattaagggc
ggctctgcttccagtgtgaccactgtgacgaactgcggcgccaaatccgcttcggacaag
gtggtgcagcacaacggccagggtacggtcaacatcgacggcttctacgccgaaaacttc
ggcaagctctaccgttcgtgcggcacgtgcggtgacatccctcgcaccgtgacactgaag
aacgtgtacgcggtggacccgctggtgagcgttgtcacggtgaacaagaactacggcgac
aaggccaccctgagcaacatccgcgtcaagacgtcggacggcaacaacgacgtgaaggtg
tgccagtggtcgcagggcggcagcacgccgtcgaacctgggcgacggaccttcgggcacg
ctctgccagtactcggagagcgacgtgcagatcaaccagtaa
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