Phytophthora sojae: PHYSODRAFT_329865
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Entry
PHYSODRAFT_329865 CDS
T03459
Name
(RefSeq) pectate lyase
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
psoj
Phytophthora sojae
Pathway
psoj00040
Pentose and glucuronate interconversions
psoj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PHYSODRAFT_329865
Enzymes [BR:
psoj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
PHYSODRAFT_329865
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase
Motif
Other DBs
NCBI-GeneID:
20646009
NCBI-ProteinID:
XP_009524699
JGI:
Physo3_329865
UniProt:
G4ZA94
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MTGMIHRHGFEPLGSPASPTAAWLQENNWPIRSSPSWSLMPKHRINWSSSSPHQLRSSST
LTKTLLLLQSTMVKSFANFATTIALAIAAASAASLPDGTWPASTGTVQFSEAHIVKAGEV
FDGKMQTYERSDISCEGQTESGASTAVFKLEPGSTLKNVIIGKNQMEGVHCDKHDCVIEN
VWWDDVCEDALSVKGGTASSVTTVTGGGARYADDKVIQHNGYGTVKIDGFYGEDVSKLYR
SCGTCGDKQRKVDVANVYVVNPTNAVVTVNKNWNDEATLSNVWVKSSGKKTVKICQWSQG
NADGEPSILGHGPSPPLCQYSESDVRVNEDISQAAQTSTAASASASASSSQTPAQQSSSF
SDSSLASSAAASSQTSSNSSTEASEASAPGTVAPVESGSLEQLVVSSAGSQTEQQQDSTE
QPAALPSASGSSPTSSSGSTYSSSDDVTQAAAQQSSVASSSESDLTQSVQQQTGIVLECD
SSSSKASEQTSQLSSVASSSALDPPQAPNVILECDSSSSSGSSNQQVEVPSLQSTTSASA
STSSASNSGVESQQENVAPSASGSTSSTSTYSSAATAPSSSSSSSGSTTDPTTQNSNAGS
PTQSSSTGSTAQTTGSDSTEQTATNTTPYTIKAGEVFDGKMQTFERSDITCTDGEGQKDS
AVFLVEAGGTLKNAIIGKNQKEGVHCDDHDCTIENVWWDDVCEDALSIKGGTASSVTTVT
NCGARYASDKVVQHNGYGTVKINGFFAQEFGKLYRSCGTCGDIPRTVTVENVYAIDPLVS
LVTVNKNYNDQATLKNIYVKTTDGKGDVKVCQWSQGSKTPSNLGDGPSGTLCQYTESDVH
INEK
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgacaggcatgatccatcgccacggatttgaaccgctgggctcacccgcaagcccaaca
gcagcatggctgcaggaaaacaactggcccatcaggtcctcgccgtcgtggtcactgatg
ccgaagcaccgcatcaactggtccagcagctccccccaccagctaagaagtagctccact
ctcaccaagacactgctgctgctgcaatccacaatggtcaagtccttcgcgaactttgcg
acgaccatcgccctggcgatcgcggctgcgagcgctgcctccctgcccgacggcacgtgg
cccgccagcacgggcaccgtccagttctccgaggctcacatcgtcaaggccggcgaggtg
ttcgacggcaagatgcagacgtacgagcgctccgacatctcgtgcgagggccagaccgag
agcggcgcgtccaccgccgtcttcaagctcgagcctggatccaccctcaagaacgtcatc
atcggcaagaaccaaatggagggcgttcactgcgataagcacgactgcgtcattgagaac
gtgtggtgggacgacgtgtgtgaggacgcgctgagcgtcaagggcggcaccgcctccagt
gtcacgacggtcacgggcggcggcgctcgctacgccgacgacaaggtcatccagcacaac
ggctacggcaccgtcaagatcgacggcttctacggcgaggacgtcagcaagctctaccgc
tcgtgcggcacgtgcggcgacaagcagcgcaaggtggacgtggccaacgtctacgtcgtg
aacccgaccaatgccgtcgtgacggtgaacaagaactggaacgacgaggccacgctcagc
aacgtctgggtcaagtccagcggcaagaagacggtcaaaatctgccagtggtcgcagggc
aacgccgacggcgagccctccatcctgggccacgggccgtccccgccgctctgccagtac
tcggagagcgacgtgcgcgtgaacgaggacatttcccaggcggcgcagacttcgaccgcg
gcgtcggcttccgcttcggcttcatcgtcgcagacgcccgcacagcagtcgtcgtccttc
agcgattcatcactcgcttcgtcagccgcggcgtcatcgcagacgtcgtcgaactcgtcc
accgaggcgtccgaggcgtctgcccccggcacggtggcgcctgtggagagcggcagcctg
gagcagttggttgttagcagcgctggtagtcagaccgagcagcagcaagactcgacggag
cagccggccgctctcccttcagcctcgggatcgagcccgacctcaagctccggctcgacg
tactcgtcttcggacgacgtgacacaagctgccgcccagcagtcgagcgtcgcctccagc
agcgagagcgacctgacccaatcggttcaacagcagaccggtatcgtgctcgagtgcgac
tcgagctctagcaaggcctcggagcagacctcccagctgtctagcgtcgcgtccagcagc
gctttggaccccccgcaggcaccgaacgtgatcctcgagtgcgattcctcgtcctcctcc
ggcagcagcaaccagcaagttgaagtgccctcgctgcagtccaccacctccgcttccgct
tcgacctcgtcggccagcaacagcggcgtagagagccaacaggagaacgtcgcgccaagt
gccagcggcagcaccagttccacttccacctacagttctgctgctaccgcccccagcagc
agcagcagcagcagcggttcgactaccgacccgactacgcagaactccaatgccggttca
cctacgcagagttccagcacgggctcaaccgctcagacgacaggcagcgactcaaccgag
caaaccgccaccaacacgactccgtacaccatcaaggccggcgaggtcttcgacggcaag
atgcagacgttcgagcgctccgacatcacgtgcaccgacggtgagggccagaaggactcc
gccgtgttcctcgtcgaggccggcggcaccctcaagaacgccatcatcggcaagaaccag
aaggagggcgtccactgcgacgaccacgactgcaccatcgagaacgtctggtgggacgac
gtgtgcgaggacgcgctgagcatcaagggcggcactgcttccagtgtgaccaccgtgacc
aactgcggcgcgcgctacgcctcggacaaggtggtgcagcacaacggctacggcaccgtc
aagatcaacggcttcttcgcgcaggagttcggcaagctctaccgctcgtgcggcacgtgc
ggagacatccctcgcactgtgacggtggagaacgtgtacgccatcgacccgctcgtgagt
cttgtgacggtgaacaagaactacaacgaccaggccacgctcaagaacatttatgtcaag
acgacagacggcaagggcgacgtcaaggtgtgccagtggtcgcagggcagcaagacgccg
tccaacctgggcgacggaccgtcgggcacgctctgccagtacacggagagtgacgtccac
atcaacgagaagtaa
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