Phytophthora sojae: PHYSODRAFT_330130
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Entry
PHYSODRAFT_330130 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
psoj
Phytophthora sojae
Pathway
psoj03013
Nucleocytoplasmic transport
psoj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PHYSODRAFT_330130
03015 mRNA surveillance pathway
PHYSODRAFT_330130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psoj03019
]
PHYSODRAFT_330130
03041 Spliceosome [BR:
psoj03041
]
PHYSODRAFT_330130
Messenger RNA biogenesis [BR:
psoj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PHYSODRAFT_330130
Spliceosome [BR:
psoj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
PHYSODRAFT_330130
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
TBCA_PH
AA_kinase
Motif
Other DBs
NCBI-GeneID:
20646061
NCBI-ProteinID:
XP_009525022
JGI:
Physo3_330130
UniProt:
G4Z4X6
LinkDB
All DBs
Position
Unknown
AA seq
187 aa
AA seq
DB search
MTIRGTSAAQDGRHLAQEKKLLAAMSFPKCFDQRVDMRKVQREVVNQWVTERLTQLLGFE
DDIVVSMAINLLEPKVDERLDPRQLQVALTGFLEKQAGQFTEELWTLLLSAQSNPTGIPS
AILDRKKQEMQRFASDKDKLKKVLEAKRAAAEDGATTQPRARQSQGGAQETLEESAETAT
QSSAPSP
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgacgatccgcggcacgagcgcggcgcaggacgggcggcacctggcgcaggagaagaag
ctgctggccgcgatgagcttccccaagtgcttcgatcagcgcgtggacatgcgcaaggtg
cagcgcgaggtggtgaaccagtgggtcacggagcggctcacgcagctgctgggcttcgag
gacgacatcgtggtgtccatggccatcaacctgctggagcccaaggtggacgagaggctg
gacccgcgccagctgcaggtggcgctcacgggcttcctggagaagcaggcgggccagttc
acggaggagctctggacgctgctgctcagcgcgcagagcaaccccacgggcatccccagc
gccatcctggacaggaagaagcaggagatgcagcgcttcgcgagcgacaaggacaagctc
aagaaggtgctggaggccaagcgcgcggccgctgaagacggagcgacgacgcagccccga
gcgaggcaatcgcagggaggagcccaggagacgctcgaggagtctgcagagacggccacg
cagtcctccgcgccgtctccgtag
DBGET
integrated database retrieval system