Phytophthora sojae: PHYSODRAFT_330794 Help Entry PHYSODRAFT_330794 CDS       T03459                                  Name (RefSeq) RNA polymerase II large subunit   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism psoj  Phytophthora sojae Pathway psoj03020   RNA polymerase psoj03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:psoj00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     PHYSODRAFT_330794   09124 Replication and repair    03420 Nucleotide excision repair     PHYSODRAFT_330794  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:psoj03021]     PHYSODRAFT_330794    03400 DNA repair and recombination proteins [BR:psoj03400]     PHYSODRAFT_330794 Enzymes [BR:psoj01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      PHYSODRAFT_330794 Transcription machinery [BR:psoj03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      PHYSODRAFT_330794 DNA repair and recombination proteins [BR:psoj03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       PHYSODRAFT_330794 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_5 RNA_pol_Rpb1_1 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_R RNA_pol_Rpb1_4 Motif Other DBs NCBI-GeneID:  20646174 NCBI-ProteinID:  XP_009525799 JGI:  Physo3_330794 UniProt:  G4ZH68 LinkDB All DBs Position Unknown AA seq 1852 aa AA seqDB search MSSTQFSYSSARLRRVKYLQFGVFSPEEIRAMSVTKQTKVNDRIIPDGISRPETYLNGHP VIGGIGDPRMGTCDFRARCKTCDCTYSGSGGKVNDCPGHFGHIELARPMYHMGFIKEVLK ILRSVCFHCSKVLSDERDHRFRSAMKIKNGKRRLKAVYEICSNKSMCEYGEEADMEKMRE DLNIGLQGGLDDKSKPKEGGHGGCGGLQPKYRKQGIKLLVEFPEQMEDVPGSGDRKQNLP AAKVLSIFKNISDEDCFALGLDPRWARPDWLVMTLMPVPPPHVRPSVAIDGMARGEDDLT HNLASIVKANLALLNCVRKGEPSHIIEQFEQLLQFHLATFLNNEQPGLPQAQQRSGKPLK TLRQRLRGKEGRIRGNLMGKRVDFSARTVITADPNIAIDQVGVPRSIAMNLTVPERVTPF NMNYMHQLIANGPLEHPGAKYIIREDGNRIDLRYIKNKSDLALKCGWIVERHLRDDDLVL FNRQPSLHKMSIMSHRVKVFDWSTFRLNLSVTSPYNADFDGDEMNLHVPQSMTARADAQE LMMVHKVIITPQSNRPVMGIVQDSLLGAQKFTKRDIFLTKDWVMNLLMWVSNWDGKVPTP AILVPKKGELGKYTPIWTGKQLFSTIVPGINFTGFSSTHNSKEKFSDLSPIDSRVIIQQG ELLAGIIDKKIIGSSAGGLIHITMLEKGPDETKRLLGAIQQLVNNWLVGRSFTVGVSDTI ADVSTLKTIVDIITQAKVQVHDLVVRGQKGKLETQPGRTMVESFEGLVNIVLNTARDQAG REAQGSLDETNNIKATVTSGSKGSFINISQIIACVGQQNVEGKRIPYGFNHRTLPHYGKD DLGPESRGFVENSYLKGLTPQEFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMESVMT RYDGTVRNAQGEIIQFLYGEDGMDAVWVEKQRFESHKLNKVQFEKKYVFDPSDEELGCVP NCPDQLYLEPDIIKDIRTNQRTQQLLREELAQLQKDRVNLRVILASRGQGQESDNAAQIP VNIRRLVENAQQLFSIDMRKPSSLHPSRIIEGVKELCKKIIVVQGDDRLSIEAQENATLF FQILLRSTLASKCVTLEHRLTETAFEWLMGEIESKFTSALVSAGEMAGVVGAQSIGEPAT QMTLNTFHYAGVSAKNVTLGVPRLKEIMNIAKDVRTPSLRIFLTPDCAHDADKAKFIQSQ LEYTTLADVTANTSIYYDPDPMNTVVEEDQEFVASYYEMPDEDTPIARSPWLLRIELNPK MMADKKLTMGEIAAQVESEYGQDLSCIFTDDNADRLVLRIRIMSDEEEKLQRSGETAVGQ EDDTFLKRVEHNMLTQMKLRGIEGVKKVYIREGPSTHWFDDVGFKMMNEWMLDTDGTNLL DVMCYPQVDATRTISNDIVEIIQVLGIEAVRRALLNEIRQVISFDGAYVNYRHLACLCDV MTFRGHLMAITRHGINRDDSGPLVRCSFEETVEILMDAAMFSEGDPLTGVSENVMLGQLA PLGTGIMDLVLDAKKLANAIEYEASEIQQVMQGLDNEWRSPDQGPGTPMATPFASTPGFS ASSPFSPGGGSFSPAAGAFSPMASPASPGFMAASPAHSPASPLNPTSPAYSPMSPAYSPT SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS PAYSPTSPAYTPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS PAYSPTSPAYSPTSPSYSPASPEYNPTEGYNPTASGYSPTDGDEKKEEEDAK NT seq 5559 nt NT seq  +upstreamnt  +downstreamnt atgtcgtccacgcagttctcgtactcgagcgcgcgcctgcgccgcgtcaagtacctgcag ttcggcgtgttcagccccgaggagatccgcgccatgtccgtgaccaagcagaccaaggtc aacgaccgcatcatcccggatggcatctcgcgcccggagacgtacctgaatggccacccc gtcatcggcggcatcggagacccacgcatgggcacgtgcgacttccgcgcgcgctgcaag acctgcgactgcacctacagcggcagcggcggcaaggtgaacgactgtcccggccacttt ggccacattgagctggcccgacccatgtaccacatgggcttcatcaaggaggtgctcaag atcttgcgctccgtgtgcttccactgctccaaggtgctgagcgacgagcgcgatcaccgc ttcaggtcggccatgaagatcaagaacggcaagcgccgcctcaaggccgtgtacgagatc tgcagcaacaagagcatgtgcgagtacggtgaggaggccgacatggaaaagatgcgcgag gacctgaacatcggtctgcagggcggtctggacgacaagtccaagcccaaggagggaggc cacggcggttgtggtggtcttcagcccaagtaccgcaagcagggcattaagctgctggtc gagttccccgagcagatggaggacgtgcctggatcgggcgaccgcaaacagaacctgcct gccgcgaaggtgctctcgattttcaagaacatctcggacgaagactgcttcgctctcgga ctggacccgcgttgggctcgtccggactggctcgtcatgacgctgatgcccgtgccgcct ccgcacgtccgtccttctgtggctatcgatggcatggcgcgtggtgaagatgaccttaca cacaacctggcgtctatcgtgaaggcaaacttggcgctgctcaactgcgtgcggaagggt gaaccgtcgcacattatcgagcagttcgaacagctactgcagttccatttggctaccttc ctcaacaatgaacagcccggtctccctcaagcccaacagcggtccggaaaaccgctgaag acgctgcgacagcgtttgcgtggtaaagagggtcgtattcgtggtaacctcatgggtaag cgtgtggacttctcggcccgtaccgtcatcacggccgaccccaacattgccattgatcaa gtcggtgtccctcgttcgatcgccatgaaccttaccgtgccagaacgtgtcacgccgttc aatatgaactacatgcatcagctgattgcgaacggtccgctggagcaccctggcgccaag tacattattcgtgaagatggcaaccgcattgatttgcgttacatcaagaacaagtcggac cttgcgctgaagtgtggatggatcgtggagcggcatcttcgtgacgacgacttggtgttg ttcaaccgtcagccgtctcttcacaagatgtccattatgtctcatcgcgtgaaggtgttt gactggtcgacgttccgtttgaacctgtccgtcacatcaccgtacaacgccgatttcgat ggtgatgaaatgaacttgcacgtgccgcagtccatgactgctcgtgccgacgcacaggag ctgatgatggtgcacaaggtgattatcaccccgcagagtaaccgtcccgtcatgggtatt gtgcaggactcgctgctgggtgctcagaagtttaccaagcgtgacattttcttgaccaag gattgggtcatgaacctgttgatgtgggtttccaactgggatggaaaggtgccgacgcct gcaattctggtgccgaagaagggtgagttgggcaagtacactccgatctggacgggcaag cagctcttctcgacgattgtaccggggattaactttactggcttttcgtccacacacaac agcaaggagaagttctcggatctctctcccatcgactctcgcgtgatcattcagcagggt gaactacttgctggtattattgacaagaagattattggttcgtcagcaggtggtttgatt cacatcacgatgcttgaaaagggtcccgatgagacgaagcgcctccttggtgcaattcag caactggtaaacaactggttggttggccgcagtttcactgttggtgtgagtgacacaatt gccgatgtgtcgactttgaagactattgtcgatattattacccaagccaaggtgcaagtg cacgatctggtggtgcgtggtcaaaagggaaaacttgaaacccagcctggccgaaccatg gttgagtcgtttgaaggtctcgtcaatattgtgcttaacacagcccgtgaccaggccggt cgtgaggcgcagggcagtctggatgagacaaacaacattaaggctacggtgacgtcgggt tccaagggttctttcattaatatctcgcagattattgcttgcgtgggccagcagaacgtt gaaggaaagcgtatcccgtacggcttcaaccatcgtacgttgccgcactacggcaaggac gatttgggccccgaaagtcgtggtttcgtggagaactcgtacctgaagggtttgacacct caagaattcttcttccacgccatgggtggtcgtgaaggtctaattgatacggctgtgaag acggccgagactggttacattcagcgccgtctggtgaaggcaatggagtcggttatgacg cgttacgatggtaccgtccgaaatgcgcaaggcgagattatccagttcctgtacggtgaa gacggtatggatgccgtttgggtcgagaagcagcggttcgagtcacacaagctgaacaag gtccagttcgagaaaaaatatgtgtttgatccgtctgacgaagagcttggctgtgtgccg aactgccccgaccagctttacctcgagcccgatattattaaggacatccgaacgaaccag cggacacagcaactcttgcgagaggaactggctcagcttcagaaggaccgtgtcaacctg cgtgtcattttggcaagtcgtggtcaggggcaggagtccgataacgctgcccagattcct gttaatatccggcgtctggtggaaaatgcccagcagctattcagcatcgacatgaggaag ccgtctagcttgcacccatcccgcattattgagggtgttaaggagctgtgcaagaagatt attgtcgtgcagggcgatgaccgactgagtattgaagcccaggagaacgcaactttgttc ttccagattctgttgcggtcgacgctggcctccaagtgtgttacgcttgagcaccgcctg actgagacagcgttcgaatggctgatgggtgaaattgagtccaagtttactagcgctttg gtgtctgctggtgaaatggctggtgttgttggtgcgcagtcgattggtgagccggcgacg cagatgacgctgaacacattccactacgccggtgtgtccgcaaagaacgtgacgcttggt gtgcctcgcctgaaggaaattatgaatatcgcaaaggacgtgagaactccgtcattgcgt atcttcttgacacccgattgcgcacacgatgccgacaaggcaaagttcattcagtcgcaa ctcgaatacacaacgctggctgatgtgacggcgaacacctccatctactacgacccggac ccgatgaacactgtggttgaggaagaccaggagttcgtggcgtcgtactacgaaatgccc gatgaagacacgccgatcgctcgttctccgtggcttctgcgtatcgagctgaacccgaag atgatggccgacaagaagctgacgatgggcgaaattgccgcgcaggttgagtccgagtac ggtcaggatctttcatgtatcttcacggatgataacgccgatcgtctcgtgctgcgtatt cgtattatgagcgatgaggaggagaagctccagcgctcgggtgagactgccgtaggacag gaagatgacacgttcctgaagcgtgtggaacacaacatgctgacgcagatgaagctgcgc ggtattgagggtgtgaagaaggtgtacattcgcgagggcccgtcgacgcactggttcgac gacgttggcttcaagatgatgaatgagtggatgctggatacggatggcacgaacttgctt gatgtaatgtgctacccgcaggtcgatgccacccgtaccatttcgaacgatattgtggaa atcattcaggtgctgggtattgaggccgttcgtcgcgctcttctgaacgaaatccggcag gttatttcgttcgatggtgcttatgtgaactatcggcatttggcttgcttgtgtgacgtg atgacgttccgtggtcacctcatggctatcactcgccacggtatcaaccgtgacgactct ggcccgcttgtccgatgttcgttcgaggagacggtggagattctgatggatgctgctatg ttctcagagggtgacccgttgacgggtgtgtccgaaaatgtgatgcttggccagctggcc cctcttggtacgggtatcatggacctggtgctcgacgccaagaagcttgcgaacgctatc gagtacgaggcttcggagatccagcaggtgatgcagggtctcgacaacgagtggaggagc ccggaccaaggacctggtacgccgatggcgactccgttcgcgtcgacgccgggcttttcg gcctcgtcgccgttcagccctggtggcggttcgttctcgccggcggctggtgccttctcg cccatggcgagtccggcatctcccggattcatggcggcttcgcctgcgcacagcccagcg tctccgctgaaccccacatcgcctgcatacagccccatgtccccagcctactctcccact tcgcctgcgtacagtccgacttcgcctgcttacagcccgacatctcccgcgtactcgccg acgtcacctgcttacagccccacgtcgcctgcatactcgccgacctcgccggcttacagc ccgacttccccagcgtattcgccgacgtccccggcatacagcccgacgtctccggcctac agccccacttcgccggcgtactcgccgacttccccagcgtacagcccgacgtctccggct tactcgccgacatcgcctgcatacagcccgacgtctccagcttacagcccgacttcgcct gcgtactcgccgacgtctcctgcgtacagcccgacgtctccggcctacagtccgacgtct ccggcttacagtcctacttctccggcatacacacccgcgtactcgccgacgtctccagcc tacagtccgacatcaccagcgtattcgccgacgtcgcctgcctactcgccgacatcgcct gcgtactcgcccacatcgcctgcctactcgcccacatctccagcgtacagcccgacgtcg cccgcctactcgccaacgtctccggcgtacagcccaacgtcgccaagctacagcccagcg tcgcccgagtataaccctacggagggctacaacccgactgcgagcggctacagtccgact gatggtgacgagaagaaggaggaggaggatgcgaagtaa

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