Phytophthora sojae: PHYSODRAFT_332696
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Entry
PHYSODRAFT_332696 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
psoj
Phytophthora sojae
Pathway
psoj03030
DNA replication
psoj03410
Base excision repair
psoj03420
Nucleotide excision repair
psoj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PHYSODRAFT_332696
03410 Base excision repair
PHYSODRAFT_332696
03420 Nucleotide excision repair
PHYSODRAFT_332696
03430 Mismatch repair
PHYSODRAFT_332696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psoj03032
]
PHYSODRAFT_332696
03036 Chromosome and associated proteins [BR:
psoj03036
]
PHYSODRAFT_332696
03400 DNA repair and recombination proteins [BR:
psoj03400
]
PHYSODRAFT_332696
DNA replication proteins [BR:
psoj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PHYSODRAFT_332696
DNA Replication Termination Factors
ELG1-RFC complex
PHYSODRAFT_332696
Chromosome and associated proteins [BR:
psoj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PHYSODRAFT_332696
DNA repair and recombination proteins [BR:
psoj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PHYSODRAFT_332696
Check point factors
HRAD17(Rad24)-RFC complex
PHYSODRAFT_332696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
Mg_chelatase
AAA_14
AAA_16
RuvB_N
Viral_helicase1
AAA_19
AAA_11
RCF1-5-like_lid
AAA_5
nSTAND3
AAA_30
MeaB
DNAX_ATPase_lid
AAA_assoc_2
IstB_IS21
AAA_3
ABC_tran
AAA_24
AAA_25
bpMoxR
NPHP3_N
AAA_7
AAA_18
AAA_28
NTPase_1
RNA_helicase
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
20646507
NCBI-ProteinID:
XP_009528034
JGI:
Physo3_332696
UniProt:
G4ZD28
LinkDB
All DBs
Position
Unknown
AA seq
326 aa
AA seq
DB search
MADDFEAPWVEKYRPRVLADVVGNRDTVASLQAMAQAGNMTNLILSGPPGTGKTTSILCL
ARELLGASMKQAVLELNASDDRGIDTVRSKIKMFAQQKVTLPPGRHKIVILDEADSMTAA
AQQALRRTMEIFSATTRFALACNNSTKIIEPIQSRCAILRYTRLPDEMLLRRLLTVCQEE
KVGYKEEGLAALIFTAEGDMRNALNNLQATASGFGFVSDENVFKVCDQPHPAVVREILNQ
CAKGELDGAEKQAVELWKSGYSSLDIIGTIFRVCKALPMEDEKLKLEFIKLIGATHMCIA
DGVSTLLQIHGLVARLCSAALAAKTG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacttcgaggcaccgtgggtggagaagtaccggccgcgcgtgctggcggac
gtggtgggcaaccgcgacacggtggcgagtctgcaggccatggcgcaggcgggcaacatg
acgaacctgatcctgtcgggcccgccgggcacgggcaagaccacgagcatcctgtgtctg
gcgcgcgagctgctgggcgcgagcatgaagcaggcggtgctggagctcaacgcgtcggac
gaccgcggcatcgacacggtgcgcagcaagatcaagatgttcgcgcagcagaaggtgacg
ctgcccccgggccgccacaagatcgtgatcctggacgaggccgactcgatgacggccgcg
gcccagcaggcgctgcgccgcaccatggagatcttctcggccacgacgcggttcgcgctg
gcctgcaacaactcgaccaagatcatcgagcccatccagagccgctgcgccatcctgcgc
tacacgcggctgcccgacgagatgctgctgcgtcggctgctcacggtctgccaggaggag
aaggtcggctacaaggaagaaggactggccgcactcatcttcacggccgagggggacatg
cgcaacgcgctcaacaacctgcaggccaccgccagcggcttcggtttcgtgagcgacgag
aacgtgttcaaggtgtgcgaccagccgcacccggcggtggtgcgagagatcctcaaccag
tgcgccaagggcgagctggacggcgcggagaagcaggcggtggagctctggaagagcggc
tactcgtcgctggacatcatcggcaccattttcagggtgtgcaaggccctgcccatggag
gacgagaagctcaagctcgagttcatcaagctcatcggcgccacgcacatgtgcatcgcg
gacggcgtgtcgacgctgctgcagatccacggacttgtggccagactgtgctcggctgca
ttggcggccaagactgggtga
DBGET
integrated database retrieval system
