Phytophthora sojae: PHYSODRAFT_335652
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Entry
PHYSODRAFT_335652 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psoj03009
]
PHYSODRAFT_335652
Ribosome biogenesis [BR:
psoj03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
PHYSODRAFT_335652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
WDR55
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WDR54
Beta-prop_SCAP
Beta-prop_DCAF4
NBCH_WD40
PQQ_3
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_CAF1B_HIR1
PQQ
Beta-prop_Vps41
Beta-prop_HPS5
PEP5_VPS11_N
KNTC1_N
WDR90_beta-prop_4th
Beta-prop_NWD2_C
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_Nup120_160
VPS11_N
Hira
Motif
Other DBs
NCBI-GeneID:
20647068
NCBI-ProteinID:
XP_009531395
JGI:
Physo3_335652
UniProt:
G4ZRS9
LinkDB
All DBs
Position
Unknown
AA seq
390 aa
AA seq
DB search
MATTALADHVLLLGSSQENELLVADASTGGQLYCFKNCRSALNGVHAVPRTDHLVAVQEG
KLALNLWNWGKDMPVWKCHVAEKMGPVTSSTCGNFLFAGAESGKVYVWDVKTGELVTVFD
AHYKRVSALALTSDDSHLITAGEDALVHAWRLVDLLDEPDAASSFQQGVTPVVSFTDHVL
PVTSLHVGLGGVNARIYTSSLDRTCKIWSLSSSQCLYSVSCPSYVNACVSDPMEQRLFMG
CGNGRVYALDLNAAATAATAATARVANASTGPTSGANVSPWGPEALLPGSFEGHETSVTT
LQIHASGAFLVSGDENGVVHVWDSLSRQSLRNIKLFKGKVTALVLLPRPRHLFRQAKTAF
TMESEDLDDLLATPLPVAPLKKYMNATNDN
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacggcgctggcggaccacgtgctgctgctgggctcgagccaggagaacgag
ctgctggtggccgacgcctccaccggcggccaattgtactgcttcaagaactgccgctcg
gcgctcaatggcgtgcacgcggtgccccgcaccgaccacttggtggctgtgcaggagggc
aagctggcgctcaacctctggaactggggcaaggacatgcccgtgtggaagtgccacgtg
gctgagaagatggggcccgtgacgtcctcgacctgcggcaacttcctgttcgctggagcg
gagtcgggcaaggtctacgtgtgggacgtcaagacgggcgagctggtgacggtgttcgac
gcccactacaagcgcgtgtcggcgctggcgctcacgtcggacgactcgcacttgatcacg
gctggagaagacgcactggtgcacgcgtggagactcgtggacttgctggacgaaccggac
gctgcgtcgagcttccagcagggcgtgacgcccgtggtgagcttcacagaccacgtgctg
cccgtgacctcgctgcacgtgggtctcggcggcgtcaacgcgcgcatctacacgtcgtcg
ctggaccgtacctgcaagatctggtcgttgagctcgtcgcagtgcctgtacagtgtgtcg
tgcccgtcttacgtcaacgcatgcgtctctgaccccatggagcagcggctcttcatggga
tgcggcaatggccgggtctatgctttggacctgaacgcagcagcgactgcggctactgcc
gctacggctcgtgttgccaacgcatcgacgggcccgacttctggtgccaatgtttcgccg
tggggtccggaggctttgctgccgggttcgtttgaaggacacgaaacgagcgtgaccacg
ttgcagattcacgccagcggtgcgttccttgtatctggagacgagaacggcgtcgtgcat
gtgtgggacagtctgagccggcagtcactgcgcaacatcaagctttttaagggcaaagtc
acagccttggtgcttcttcctcggccgcgacacctcttccgccaggcgaagacggcgttc
accatggagagtgaggatctcgacgacctgctggctacgccgctgcccgtcgccccgctc
aagaaatatatgaacgccaccaacgacaactag
DBGET
integrated database retrieval system