Phytophthora sojae: PHYSODRAFT_338355
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Entry
PHYSODRAFT_338355 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
psoj
Phytophthora sojae
Pathway
psoj03022
Basal transcription factors
psoj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PHYSODRAFT_338355
09124 Replication and repair
03420 Nucleotide excision repair
PHYSODRAFT_338355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psoj03021
]
PHYSODRAFT_338355
03400 DNA repair and recombination proteins [BR:
psoj03400
]
PHYSODRAFT_338355
Transcription machinery [BR:
psoj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PHYSODRAFT_338355
DNA repair and recombination proteins [BR:
psoj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PHYSODRAFT_338355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
DNA_pol3_chi
DUF7385
DUF7129
FTCD_N
Motif
Other DBs
NCBI-GeneID:
20647555
NCBI-ProteinID:
XP_009534447
JGI:
Physo3_338355
UniProt:
G5A4I5
LinkDB
All DBs
Position
Unknown
AA seq
324 aa
AA seq
DB search
MTAATDEDLALRCCVCGTSAEDDSNYLNTKMKMLISKCGHRLCVLQRVVWKFFCDHCIKR
EFQHQREIACPACEKPVKKSQLQDKTIEELNFAKETSVRKKVTKDYNKTEDDFDTLDEYN
DYLETLENLIFDLVYGDDNEKAAAQKQWKQYRQENAIAIATNDAKKADEERRIAQLIAEQ
QRLAEERRQLQQREDSQFEADLERQKAQLMEVALGERDESDVSKLRATTTAIPIDQAVTA
EMEAAMMGFQPGVIGGPQPVPVPGGKRGPNFGVNESKKLRRQQQLAGGYDPDLHFKRNRS
EAWCGIYFHPVDRKNEGPAPMEIC
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgactgcggcaaccgatgaggacctcgcgctgcgctgctgcgtgtgcggcacgtcggcc
gaggacgacagcaactacctcaacaccaagatgaagatgctcatctccaaatgcggtcac
cgcttgtgcgtgctccagcgcgttgtgtggaagttcttctgcgaccactgcatcaagcgc
gagttccagcaccagcgcgagatcgcgtgtcccgcctgcgagaagcccgtgaagaagtcg
cagctgcaggacaagaccatcgaggagctcaacttcgccaaggagacgtcggtgcgcaag
aaagtcaccaaggattacaacaagacggaggacgacttcgacacactggacgagtacaat
gactacttggagacgctcgagaacctcatttttgatctggtgtatggagacgacaacgaa
aaggctgcggcccagaagcagtggaagcagtaccgccaggagaacgccattgccatcgcc
acaaatgacgccaagaaggccgacgaggagcgccgtatcgcgcagctgattgcggagcag
cagaggctggcggaggaacggcgacagctgcagcagcgggaggattcgcagtttgaggcg
gatctggagcgtcagaaggcgcagctgatggaggtggcgctgggagaacgagacgaaagc
gacgtctccaagctgcgcgccacgacgacggctattccgattgaccaggccgtcacggcg
gagatggaagcggcgatgatgggcttccagccgggagtcattggtggaccgcagcccgtt
ccggttcctggaggcaagcgtggacccaacttcggtgtgaacgagtccaagaagctgcgt
cgtcagcagcagcttgccggcggctacgatccggatttgcacttcaagcgcaaccgaagc
gaggcgtggtgcggcatttacttccaccccgttgatagaaagaatgaaggtccggctccg
atggagatctgctag
DBGET
integrated database retrieval system
