Phytophthora sojae: PHYSODRAFT_339193
Help
Entry
PHYSODRAFT_339193 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PHYSODRAFT_339193
Enzymes [BR:
psoj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
PHYSODRAFT_339193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
Motif
Other DBs
NCBI-GeneID:
20647700
NCBI-ProteinID:
XP_009535390
JGI:
Physo3_339193
UniProt:
G5A602
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MLNQSSASLMNVTSSVPMQPSALVQTSGDKYIINTGAGLTIITRQASCDFVVINYNDQEP
RQHGSRPGKVVIQSLNDVKKPINVNCKKRVIKESYSFCLNKNVAGITAIEATDVVTNAGG
TTRSKYYPGLSFVDDAVHGVNSTAAGLYLVISEQGYETSSGGPFFRDINNKLGAGPDVST
LDFSFFQDQELTGFVPDAKCGEVAGTITDANDVLGDSEVVVVFSNADAQYWVKVPACIKT
FTSPKMKPALRSLRPIWRIGEWDGKPDGFLNADKIHPSNAHPEAWGPITFATGSDEDSEF
SMALFRAANDDVKITSDLTVAQAGQDKTLKIGVTLTQVNAHPDVKANDFQTKTVLSVGQD
AWYYPRRDCQDLVLEVTVGFDAQPSPGLHWGGFFHNKISAFERAITTG
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatcaatcatcagcgtcgctgatgaacgtcacctcatccgtgcccatgcagccc
tccgccttggtacaaaccagcggcgacaaatacatcatcaacaccggcgcgggcctgacg
atcatcacgaggcaggcgtcctgcgacttcgtggtcatcaactacaatgaccaggagcca
cgtcaacacggatctcggccaggcaaagtcgtgattcagtccctcaacgacgtcaagaag
cccatcaacgtcaactgcaagaagagggtcatcaaggagtcctactccttctgcctcaac
aaaaacgtcgctggcataacggccattgaagccacggatgtcgtcacaaacgcgggaggc
accacccgctccaagtactacccgggtttgtccttcgtcgacgacgccgtccatggcgtc
aacagcaccgctgccggtctctacctcgtgatctcggagcagggctacgaaacgtcgagc
ggtggaccgttcttccgtgacatcaacaacaagcttggcgccggccctgatgtctcaacc
ctcgacttcagcttcttccaggaccaggagctcacgggctttgttccggatgccaagtgt
ggcgaggtggccggtacgatcaccgacgccaacgatgttttgggcgactcggaagtcgtc
gtagtattctccaacgctgacgcgcagtactgggtcaaggtgcccgcatgtatcaagacg
ttcacgtcgcccaagatgaagcccgcgttacggtcgctgaggcccatctggcgcatcggc
gagtgggacggcaagcccgacggcttcctgaacgccgacaagatccacccgagcaacgcg
catccagaggcctggggccctatcacgttcgcgaccggttcggacgaggacagcgagttc
tccatggctctgttccgcgctgccaacgacgacgtcaagatcacgtccgacctgacggtc
gcccaggctggccaggacaagacgctaaagatcggcgtgacgctcacccaggtcaacgcg
caccccgacgtcaaggcaaacgacttccagaccaagacggttctgtcggtgggtcaagac
gcgtggtattacccgcgtcgtgactgtcaggatctcgttcttgaggttaccgttgggttc
gacgctcaaccttcaccaggcctccactggggcggcttcttccacaacaagatctcggcg
ttcgagcgagccatcacgaccgggtag
DBGET
integrated database retrieval system
