Phytophthora sojae: PHYSODRAFT_340838
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Entry
PHYSODRAFT_340838 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K10756
replication factor C subunit 3/5
Organism
psoj
Phytophthora sojae
Pathway
psoj03030
DNA replication
psoj03410
Base excision repair
psoj03420
Nucleotide excision repair
psoj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PHYSODRAFT_340838
03410 Base excision repair
PHYSODRAFT_340838
03420 Nucleotide excision repair
PHYSODRAFT_340838
03430 Mismatch repair
PHYSODRAFT_340838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psoj03032
]
PHYSODRAFT_340838
03036 Chromosome and associated proteins [BR:
psoj03036
]
PHYSODRAFT_340838
03400 DNA repair and recombination proteins [BR:
psoj03400
]
PHYSODRAFT_340838
DNA replication proteins [BR:
psoj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PHYSODRAFT_340838
DNA Replication Termination Factors
ELG1-RFC complex
PHYSODRAFT_340838
Chromosome and associated proteins [BR:
psoj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PHYSODRAFT_340838
DNA repair and recombination proteins [BR:
psoj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PHYSODRAFT_340838
Check point factors
HRAD17(Rad24)-RFC complex
PHYSODRAFT_340838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
Rad17
AAA_22
AAA_16
ABC_tran
Rep_fac_C
AAA_2
MyTH4
FtsK_SpoIIIE
AAA_29
AAA_23
Motif
Other DBs
NCBI-GeneID:
20647975
NCBI-ProteinID:
XP_009537368
JGI:
Physo3_340838
UniProt:
G5AB23
LinkDB
All DBs
Position
Unknown
AA seq
352 aa
AA seq
DB search
MLWVDKYRPTSLGELDFHPEVTKRLTNLSQSSDLPHLLVYGPSGAGKKTRIMALLRALYG
DGALKVRLEHKAFKAPHRSTKVEITTVASNFHIEMNPSDVGNNDRLVVQKVLKEIAQYHM
ADTNSQRPFKVVLLMEVDRLSKGAQHALRRTMEKYTATCRLVLCCNNPSKVIDPLRSRCL
GVRVGAPTTDEICGVLQGVCSKEGLAYCAPLGQEIAVKSERNLRRALLMLETCRVQNYPF
SPDQQIQLPAWEEYICSLSKVVLQEQSPAGLLKAREMIYELISNCVPSEVILKVLCRELM
SRLDDDLKHELVQWASYYEHRMQRGSKDIFHFEAFLAKFMTLYKKFLLDLYM
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgggtggacaagtaccggccgacgtcgctgggggagctggacttccacccggag
gtgaccaagcggctgacgaacctgtcgcagtcgtcggacttgccacacctgctcgtgtac
gggccgtcgggcgccggcaagaagacgcgcatcatggcgctgctgcgcgcgctctacgga
gacggcgcgctcaaggtgcggctggagcacaaggcgttcaaggcgccccaccgcagcacg
aaagtcgagatcacgaccgtggccagcaacttccacatcgagatgaacccgtcggacgtg
ggcaacaacgaccgcctcgtggtgcagaaggtgctcaaggagatcgcccagtaccacatg
gccgacacgaactcgcagcggcccttcaaggtcgtgctgctcatggaggtcgaccgcctc
agcaagggagcgcagcacgcgctgcgtcgcaccatggagaagtacacagccacgtgccgc
ctcgtgctgtgctgcaacaaccccagcaaggtcatcgacccgctgcgtagccgttgtctg
ggcgtgcgcgtgggcgcccccaccacggacgagatctgcggtgtactgcagggcgtctgc
tccaaggagggactcgcctactgcgcgccgctgggccaggagatcgccgtcaagagcgag
cggaatctgcgccgcgcgctgctcatgctcgagacctgccgtgtccagaactacccgttc
tcgcccgaccagcagatccagttgccggcgtgggaggaatacatctgcagtctgtccaag
gtggtgctgcaggagcagtcgcccgcagggctgctgaaggcgcgcgagatgatctacgag
ctcatctccaactgcgtgccgtccgaggtgatcctcaaggtgctgtgtcgcgagctcatg
agccgcctggacgacgacctcaagcacgagctcgtgcagtgggcctcgtactacgagcat
cgcatgcagcgcggctccaaggatattttccacttcgaggccttcctggccaagttcatg
acgctctacaagaagttcctgctggacctgtacatgtag
DBGET
integrated database retrieval system
