Phytophthora sojae: PHYSODRAFT_341199
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Entry
PHYSODRAFT_341199 CDS
T03459
Name
(RefSeq) pectate lyase
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
psoj
Phytophthora sojae
Pathway
psoj00040
Pentose and glucuronate interconversions
psoj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PHYSODRAFT_341199
Enzymes [BR:
psoj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
PHYSODRAFT_341199
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase
DDHD
EOS1
TFIIA
DUF5523
TERB2
Motif
Other DBs
NCBI-GeneID:
20648045
NCBI-ProteinID:
XP_009537804
JGI:
Physo3_341199
UniProt:
G5ACG6
LinkDB
All DBs
Position
Unknown
AA seq
303 aa
AA seq
DB search
MVPGLPVPDGTWPVSTGSVTFDKVYTVKTGEVFDGKMQTFDRFNLTCQGQQESGNSTAVF
QLEAGATLKNVIIGVNQMEGVHCDFGDCTIENVWWDDVCEDGLSIKGGNASSVTRVLGGG
ARYAKDKIIQHNGFGTVVVDGFYAQDFGKLYRSCGNCKTNPRQRSLNVSNTFVDLEIIQS
GRGMEPNGTNVSIVMMNENFGDQAVLKNFYVKPSWYNYTECASSFGVNVKGAKPAILHNG
PKYPVCQYSYDDVHIVETEENAEQQQQQQQQQEQQQQEEQQQQQQQQEQQQQEEQQLQVQ
VQL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggtacccggtcttccggtgcccgacggtacgtggcctgtcagcacaggtagtgtcacc
ttcgacaaggtctacaccgtcaagaccggtgaggttttcgacggaaagatgcagacgttc
gaccgcttcaacctcacgtgccagggtcagcaggagagcggcaactccactgccgtgttt
caactcgaggctggtgcgacgctaaagaacgtcatcatcggtgtgaaccaaatggagggc
gtgcactgcgacttcggcgactgcacgatcgagaacgtgtggtgggatgacgtgtgtgag
gacggcctgagtattaagggcggcaacgcttccagcgtgacgcgcgttcttggcggcggc
gcccgctacgcgaaggacaagatcatccagcacaacggattcggcaccgtcgtcgtcgac
ggattctacgcgcaagacttcggtaagctgtaccgctcatgcggcaactgcaagaccaac
cctcgccagcgttccctcaacgtcagcaacacgttcgtcgacctggagatcatccagagc
gggaggggaatggaacccaacggaacgaacgtgagcattgtcatgatgaacgaaaacttt
ggcgaccaggctgtcctcaagaacttctacgtcaagccgagctggtacaactacacggag
tgcgcctcgtcctttggcgtcaacgttaagggtgcgaagcccgcgatcctgcacaatggt
ccaaagtatccggtgtgtcagtactcgtacgacgacgtccacattgtcgagaccgaggaa
aacgctgagcagcagcagcagcaacagcaacaacaggagcagcagcaacaggaggagcag
cagcagcaacagcagcaacaggagcagcagcaacaggaggagcagcagcttcaagtccaa
gtgcagctataa
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integrated database retrieval system
