Phytophthora sojae: PHYSODRAFT_341977
Help
Entry
PHYSODRAFT_341977 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
psoj
Phytophthora sojae
Pathway
psoj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PHYSODRAFT_341977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psoj03021
]
PHYSODRAFT_341977
03036 Chromosome and associated proteins [BR:
psoj03036
]
PHYSODRAFT_341977
Transcription machinery [BR:
psoj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
PHYSODRAFT_341977
Coactivators
SAGA/TFTC/STAGA complex
PHYSODRAFT_341977
Chromosome and associated proteins [BR:
psoj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
PHYSODRAFT_341977
STAGA complex
PHYSODRAFT_341977
TFTC complex
PHYSODRAFT_341977
SAGA complex
PHYSODRAFT_341977
SLIK complex
PHYSODRAFT_341977
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
ORF239-like
Motif
Other DBs
NCBI-GeneID:
20648190
NCBI-ProteinID:
XP_009538640
JGI:
Physo3_341977
UniProt:
G5AEY9
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MSLLRSETLQVVAQSLGLDDLSDDCVRELLPEVELRVREVVQDALKFQRHSRRPQLDPTH
VNQALQARNLESLYGFSAPGTVKYKQCEDNDALFFAEEEELELGELLNAPLGQIPLHPVL
NVHWLAVDGVQPLIPENESVEDDSTCHTSIKDEAFVNNVDRKPRVKHVLTEEMQLYYTKV
TEAVKSDDFELQRAAFTSLAQDPGIHQLLPYFSRFIYEEVKHSNHDLSLLFSLMRACRCL
LVNQNLHVELYLHQLIPAILTCVLGTQLCENPADDHWALRKYAAKLVAQICERYGEKYAN
IQARVSKTYHKAITDPVCPFSTQYGALHGMLFLGPLVMESLLFPNLERYYRRLEPALSSS
NPNLVERLEAQNCLGILVHASGTYFSMSKSMDRGASPSLSPSALGDIVTLLYDAFGESLL
PYIRPEQPTSMLDLCL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgctgcgctccgagacgctgcaggtggtggcccagagcctcggcctggacgac
ctgagcgacgactgcgtgcgcgagctgctgcccgaggtggagctgcgcgtgcgggaggtg
gtgcaggacgcgctcaagttccagcggcactcgcggcgcccccagctggaccccacccac
gtcaaccaggcgctgcaggcgcggaacctcgagagtttgtatggcttctcggcgccgggt
accgtcaagtacaagcagtgcgaggacaacgacgcgctcttcttcgccgaggaggaggag
ctggagctgggcgagctgctgaacgcgccgctgggccagatcccgctgcacccggtgctg
aacgtccattggctggcggtggacggcgtgcagccgctcatcccggagaacgagtcggtc
gaggacgactcgacgtgccacacgtccatcaaggacgaggccttcgtcaacaatgtggac
cgcaagccgcgcgtcaagcacgtgctgaccgaggagatgcagctctactacaccaaggtc
acggaggccgtcaagagcgacgacttcgagctgcagcgcgcggccttcaccagcctcgcg
caggacccgggcatccaccagctgctgccctacttctcgcggttcatctacgaggaggtc
aagcacagcaaccacgacctgtcgctgctcttctcgctcatgcgcgcgtgtcgctgcctg
ctggtgaaccagaacctgcacgtggagctctacctgcaccaactgatcccagctatcttg
acgtgcgtgctgggcacgcagctgtgcgagaaccccgcggacgaccactgggcgctgcgc
aagtacgcggccaagctggtggctcagatctgcgagcgctacggcgagaagtacgccaat
atccaggcacgcgtgtccaagacgtaccacaaggcgattacggatcctgtgtgcccgttt
tcgacccagtatggcgctctccacggtatgctgttcttgggccctcttgtgatggagagc
ttgcttttcccaaatctggagcgatactaccgacgattggagccggcgctgtcttcgtcg
aaccccaatcttgtcgaaaggctagaggcgcagaactgcctcggcatcctcgtgcacgcg
tctggaacctatttttcaatgtccaaatcgatggaccgcggtgcatcgccgtccctgtcg
ccatcagctctaggcgacatcgtgaccctgctgtacgacgcgtttggcgaaagcctgttg
ccctacattcggccagagcagccgacaagtatgctcgacttgtgcctttag
DBGET
integrated database retrieval system
