Phytophthora sojae: PHYSODRAFT_344575
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Entry
PHYSODRAFT_344575 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psoj03009
]
PHYSODRAFT_344575
Ribosome biogenesis [BR:
psoj03009
]
Eukaryotic type
90S particles
Other 90S particles
PHYSODRAFT_344575
Pre-60S particles
Other pre-60S particles
PHYSODRAFT_344575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
XMAP215_CLASP_TOG
Peripla_BP_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
20648647
NCBI-ProteinID:
XP_009519240
JGI:
Physo3_344575
UniProt:
G4YZ94
LinkDB
All DBs
Position
Unknown
AA seq
1280 aa
AA seq
DB search
MLPRGEPNPSAVLPGGQWFALHLFTRLLGSIDWHCSTADAGRKDPPDAMDPFTELRKHAG
GAHPQKAKLNVVLAAICDVIYERRGSGDRSSPISPTEYFAALMTALDAASDSHRQEVAQL
LSMVLPDVPDAVLRGKFAAVAKCLTTVLQEAGDDAALLRSASACLALALMAQEPSATAWA
RPELLRSFQLLLTLAMDTRPKVRKAGHKWTMDILELHTAKGCDALSTHIASFAENVFASS
GKDGKDDQRLVLLVAFLKLALPLLQRKVVASLVSALAKFLDANSKTLRLVTYEALDALSA
APESQLTADALRKLVIAVLDAQSSGSLEAQGGPVAIYAVRIPSQSLVRLAAVNTEAAREL
LPRVVSAICSHISTENDRTQRQATRSLLDVLKATLTPEVLETEGTFEDVARVLASLQSLT
SLRFQSAWNHVFPLIAELFRFYGAASRPALEPILVTCCELHEAADQLPQQQQGGKSAKAL
SDLFALAAGAAVEALGPRAFLEIVPIDHPTEVVSEQRAWLLPVFRDALRAAQRGGELAFF
ADVVLPMARACEAGAREPSVTPLQAKKLQTRAIQLWSLFPSVCARAVDIVTHFKKIAKVL
ASAMADKRYPELRLAVCQGLQALVKRTRALQKSVARRYHRENDDAELEDAEEEAEEEEDE
MEQLDEAKLARDRAALAKFSGRYVPLLLSFVEELDPEKDTERAQVLLDTLEGFASLAEAE
LIGTTFKKVMQKLLEATTEAKKVEAEGAGSHSKRATKLRQTSHAQMALALALLAHVDDSN
VALLYRVIKPYLLDDADAAMQKRSYAALVAICDSHPKFLSEESQLQDLTRAICESLLTCS
VPAKKMRLRVLAHLIRALQAQPATDGLAEKELVPNLVGEIMLCTKEANGKAREAAFELLV
AMVMLLRARDPQNGLMEFIQMVLGGLAARTPHMRSAAVICLSRLVFEFGREDPSIAQAMP
ALLKTVLMLLHEKAREVIKSVIGFMKLGIAVLPKEQLEQFLPDIINGLLVWIGESKNRFR
AKTRIILIKLCRKFGYEHVAALVPEEDRALIRHIKKTKEREDKKKSELAAEAAERRAAKK
NRDAFEEFMADSDDEGDDDEAAVMQVLKRKKDLHKKNKGGKVIREDEDDIMDFLDDNAAV
KNIFSAQKGGHDDDESDDEFQMTKDGRMIIPGGEDDDMEGGSDSDDEDKIKQDVASQLQR
MGLHNNSKNDKNGRAKRKRGDEDVSSGREYRAKKASGDIKKKGKLEPYAYIPLDPKLMAK
RNKREAVTRYGNVGKRRGKK
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgctgccaagaggggagcccaatccatctgcagtcctgcctggcggccagtggttcgcc
ttgcatctcttcactcgcttgctgggctccattgattggcattgctccaccgccgacgca
ggaaggaaggacccccccgacgcgatggacccgttcacggagctgcgcaagcacgcgggc
ggcgcgcacccgcagaaggccaagctgaatgtggtgctggccgccatctgcgacgtcatc
tacgagcgccgtggcagcggcgaccgctcgtcgcccatctcgcccaccgagtacttcgcc
gcgctcatgacggcgctggacgccgcctcggactcgcaccggcaggaggtcgcgcagctg
ctgtccatggtgctgccggacgtgccggacgccgtgctgcgcggcaagttcgcggccgtg
gccaagtgcctcaccaccgtgctgcaggaggccggagacgacgccgcgctgctgcgctcg
gccagcgcgtgtctggcgctggcgctcatggcgcaggagccgtcggccacggcctgggcg
cgccccgagctgctgcgcagcttccagttgctgctgacgctcgccatggacacgcgcccc
aaggtgcgcaaggccggccacaagtggaccatggacatcctggagctccacaccgccaag
ggctgcgacgccctctccacacacatcgccagctttgccgagaacgtcttcgccagctcg
ggcaaggacggcaaggacgaccagcgcctggtgctgctcgtcgcctttctcaagctggcg
ctgccgctgctgcaacgcaaggtcgtggcctcgctcgtttcggccctcgccaagttcctg
gatgccaactccaagacgctgcgtcttgtcacgtacgaggcgctggacgcgctgagcgct
gcgcccgagtcgcagctgacggcggacgcgcttcgcaagctggtgatcgctgtgctggac
gctcaaagcagtggatctctggaggcccagggcggacccgtcgccatctacgctgttcgc
attccctctcagtctctcgtgcgtcttgccgctgttaacaccgaggcggctcgcgagctg
ctgcctcgtgtggtgagcgctatctgctcccacatttccactgagaacgaccgcacccag
cgtcaggctactcgctcgctgctggatgtcctgaaggctacgctgacccccgaagttttg
gagacggaaggcacgttcgaggacgtcgcccgcgtgctcgcctcgctgcagagtctcaca
tcgctgcgcttccagagcgcttggaaccacgtcttccccctgatcgctgagcttttccgc
ttctacggagccgccagtcgccccgcgctagagcccattctcgttacgtgctgcgagctg
cacgaggccgccgaccagcttccgcagcagcagcagggaggtaagagcgccaaggccctt
tcggacctgttcgctcttgctgcgggtgctgccgttgaggctctgggcccgcgtgccttc
ctcgagattgttcctattgaccaccccaccgaggttgtgagcgagcagcgtgcctggctg
ctgcctgttttccgtgatgcgctgcgcgctgcccagcgcggcggtgagcttgctttcttc
gcggacgtcgtgctgcccatggctcgtgcttgcgaggctggtgcgcgtgagccgagtgtc
accccgttgcaggccaagaagctacagacccgcgctatccagctctggtcgcttttcccg
agtgtgtgtgcccgtgccgtggacatcgtcacccacttcaagaagatcgccaaggttctc
gcgagcgcgatggctgacaagcgctatcctgagctgcgccttgccgtctgccagggtctc
caggctctcgtgaagcgcacgcgtgcgctgcagaagtcggttgctcgccgttaccaccgc
gagaatgacgacgccgagcttgaagatgctgaggaggaggctgaagaggaggaagatgaa
atggagcaactggacgaggcgaagctggcgcgtgaccgtgctgctctggccaagttttcg
ggtcgctacgtgccgctgctgctgtcgttcgtggaggaactggacccggagaaggacact
gaacgtgctcaggtgctgctggatacgctggagggctttgcgtcgcttgctgaagccgag
ctaatcggcacgactttcaagaaggtgatgcagaagctgcttgaggcgacgacggaggct
aagaaggttgaggccgaaggtgctggcagtcattccaagcgcgcgaccaagctccgacag
acgtcccatgctcagatggctcttgcattggccctcttggctcacgtggacgactcgaat
gtggcgctgctgtaccgtgtgatcaagccctacttgctcgacgatgccgatgctgcgatg
cagaagcgctcgtacgccgctttggtggccatttgcgactcgcaccctaagtttttgtcc
gaggagtcccagctgcaggacctgacccgtgctatctgcgagtcgcttctcacttgctcg
gttccggccaagaaaatgcgtctgcgtgtgctcgcccacctgatccgcgcgctgcaggct
cagcctgctaccgatggtctggccgagaaggaacttgttcctaacctcgtgggtgagatt
atgctttgtactaaggaggctaacggcaaggctcgcgaggccgcgttcgagttgctggtg
gctatggttatgctgctccgcgcgcgcgacccgcaaaacggattgatggagttcattcag
atggtcctcggtggtctggctgctcgcacacctcacatgcgtagcgctgccgtcatttgc
ctgagtcgtctggtattcgagttcggtcgtgaggacccttccattgctcaggccatgccg
gcgctgctcaagaccgttctcatgctgctgcacgagaaggcgcgcgaggtgatcaagagc
gtcatcggcttcatgaagctgggtattgctgtcctgcctaaggagcagctggagcagttc
ctccccgacatcattaatggtctgctggtgtggatcggtgagagcaagaaccgtttccgc
gcaaagacccgtattatccttatcaagttgtgccgcaagttcggctacgagcacgtcgct
gctctcgtgcccgaggaggaccgtgcgctgattcgccacattaagaagaccaaggagcgc
gaggacaagaagaagtcggagctggcggctgaggctgcggagcgccgtgctgccaagaag
aaccgtgacgcgttcgaggagttcatggctgactcggacgacgaaggtgacgacgatgag
gcggcggtcatgcaggtgttgaagcgcaagaaggatctgcacaagaagaacaagggtggc
aaggtcatccgcgaggacgaagacgacatcatggatttcctggacgacaacgctgcggtc
aagaacattttctcggcgcagaagggtggccacgatgacgatgagagcgatgacgagttc
cagatgaccaaggatggccgcatgatcattcctggcggtgaggacgacgacatggagggc
ggaagcgacagtgacgacgaggacaagatcaagcaggatgtcgcctcgcagctgcagcgt
atggggctgcacaacaacagcaaaaacgacaagaacggccgggcgaagcgcaaacgcggt
gacgaggatgtcagcagcggacgtgagtaccgtgcgaagaaggccagcggtgacatcaag
aagaagggcaagctggagccgtacgcttacattcctttggaccccaagcttatggccaag
cgcaacaagcgcgaggctgtgactcgctatggcaacgttggaaagaggcggggcaagaaa
taa
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