Phytophthora sojae: PHYSODRAFT_345098
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Entry
PHYSODRAFT_345098 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
psoj
Phytophthora sojae
Pathway
psoj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PHYSODRAFT_345098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psoj03000
]
PHYSODRAFT_345098
03021 Transcription machinery [BR:
psoj03021
]
PHYSODRAFT_345098
Transcription factors [BR:
psoj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
PHYSODRAFT_345098
Transcription machinery [BR:
psoj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
PHYSODRAFT_345098
RNA polymerase III system
TFIIIB
PHYSODRAFT_345098
RNA polymerase I system
SL1/TIF-1B
PHYSODRAFT_345098
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
20648687
NCBI-ProteinID:
XP_009521482
JGI:
Physo3_345098
UniProt:
G4YY26
LinkDB
All DBs
Position
Unknown
AA seq
255 aa
AA seq
DB search
MGKTPVATRSSARAVKERQLALVEEPGRELQAVGSRELQLDDDWEERLNLQVKIMNVVGT
VDLKTPLDLKTIALHARNAEYNPKRFSAVIMRLRDPKTTALIFGSGKIVITGGTSEESCR
LAARKFTRVIQKLNFPAKFTEFKVRNVMGTCDIRFPIRLEGLLNDHARFSSYEPELFPGL
IYKLVEPKLTLLIFVSGKIVLCGARDSNHLHQAIDKMYPVLLQYRKMTAPPSLMTGKPGY
EDSEDLDRLEPGANV
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggggaagacgcccgtggccacgcgcagcagcgcgcgcgccgtcaaggagcggcaactg
gcgctggtcgaggagccaggacgcgagctgcaggccgtgggctcgcgcgagctgcaactg
gacgacgactgggaggagcgcctcaacctgcaggtcaagatcatgaatgtggtgggcacg
gtggacctgaagacgccgctggacttgaagacgattgcgctgcacgcacgcaacgccgag
tataaccccaagcgcttctcggcggtgatcatgcggctgcgtgaccccaagacgacggcg
ctgatcttcggctctggcaaaattgtcatcacgggtggcactagtgaggaaagctgccgg
ttagcggcgcgcaaattcacgcgcgtaatacagaaactgaacttcccggccaagttcacc
gagttcaaagtgcgcaacgtgatgggaacgtgcgatatccgcttcccgattcggttggag
gggctgctgaacgaccacgcacgattctccagctacgagccggagctgttcccgggcctg
atctacaagctggtggagcccaaactgacgctgctgatcttcgtctcgggcaagatcgtg
ctgtgcggagcaagagactcgaaccacctgcaccaggccatcgacaagatgtaccccgtg
ctgctgcagtaccgcaagatgacagcacccccgtcgctgatgacaggcaagccaggctac
gaggatagcgaggaccttgaccgtcttgagccaggggctaacgtctaa
DBGET
integrated database retrieval system