Phytophthora sojae: PHYSODRAFT_345983
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Entry
PHYSODRAFT_345983 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
psoj
Phytophthora sojae
Pathway
psoj03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
PHYSODRAFT_345983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psoj04121
]
PHYSODRAFT_345983
03036 Chromosome and associated proteins [BR:
psoj03036
]
PHYSODRAFT_345983
Enzymes [BR:
psoj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
PHYSODRAFT_345983
Ubiquitin system [BR:
psoj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
PHYSODRAFT_345983
Chromosome and associated proteins [BR:
psoj03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PHYSODRAFT_345983
Noncanonical PRC1 (PRC1.1)
PHYSODRAFT_345983
Noncanonical PRC1 (PRC1.3/1.5)
PHYSODRAFT_345983
Noncanonical PRC1 (PRC1.6)
PHYSODRAFT_345983
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-Nse
zf-rbx1
zf-C3HC4_4
zf-RING_6
zf-RING_4
zf-ANAPC11
RAWUL
TRAF3_RING
SRP-alpha_N
Motif
Other DBs
NCBI-GeneID:
20648751
NCBI-ProteinID:
XP_009525729
JGI:
Physo3_345983
UniProt:
G4ZGG9
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MAKQQQQQSPPRNPYTFTREEYDNLVKQTPNCHLSRRSKYEEVELVDDCTLFDIYRQPRA
PVTDPAATKTLSVRQLNADLTCPICLGIIKETMVVMECLHRFCGDCISTAIRQSKRECPS
CRIHIPSKRSLRPDPNFDALISKIHPNLAEFERNEDLIIQQQNRTRHFNNAYTESTRMGV
LSQAASRRHGGRRKAEGTASASSSRPSSPSNGSTGASPPTGEKRSSPGGGSPSETAPSSA
AASEDESARKKQRVDSAAASAIASKPKESDRVTLRVLLHEDEQSDAPKLERTLFTTFAKL
KIRHLKKHLAALLKLDKYDNMCIVLPAVNCTLSGLSDEAKARKSGEIAIRQDLQCDQELD
DFVTLKDIYQQYGMGTDWELRLLYHFSAGTIVNGIAQFVSKKASVVA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcagcagcagcagcagagcccgccgcgcaacccgtacaccttcacgcgcgag
gagtacgacaacctggtgaagcagacgcccaactgccacctcagcaggcgctccaagtac
gaggaggtggagctggtggacgactgcaccctcttcgacatctaccgccagccgcgcgcg
cccgtgacggacccggcggccaccaagacgctgtccgtgcgccagctcaacgccgacctg
acgtgccccatctgcctgggcatcatcaaggagacgatggtggtcatggagtgcctgcac
cgcttctgcggcgactgcatctccaccgccatccgccagagcaagcgcgagtgcccgtcg
tgccgcatccacatcccgtccaagcgctcgctgcgccctgatcccaatttcgacgcgctc
attagcaagatccacccgaatctggccgagttcgagcgcaacgaggatctgattattcag
cagcaaaaccgcacgcggcacttcaacaatgcatacacagagagcacccgcatgggtgtg
ctcagccaagccgcctcgcgtcgtcatggagggagaaggaaagcggagggaaccgcttca
gcttcgtcgtcacgtccgtcctcaccatcgaacggatcgactggggcctcgccgcctacc
ggagagaagcgcagctcgcctggaggtggctctcctagtgagactgctccgtcgtcggct
gcggcgtccgaggacgagagcgcccgcaagaaacagcgagtggatagtgcagcagcgagt
gccattgcgtcaaagccgaaggagagtgaccgagtgactctgcgcgtgctcctgcacgaa
gacgaacagtccgacgcccccaagctggagcgcacgctgttcacgacgttcgccaagctc
aaaatccgtcacttgaagaagcacctcgccgctctcctcaagctggacaagtacgacaac
atgtgcatcgtgctgcccgccgtgaattgcacgctgagcgggctgtctgacgaggccaag
gcgcgaaagagcggtgagatcgctatccgacaggacctgcagtgcgaccaggagctggac
gactttgtgacattaaaggatatttatcagcagtacggcatgggcacggattgggagctg
cgcctgctgtaccacttctctgctggcacgattgtcaatggtatagcgcagttcgtctcg
aagaaggcgtccgtggtcgcataa
DBGET
integrated database retrieval system