Phytophthora sojae: PHYSODRAFT_349205
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Entry
PHYSODRAFT_349205 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psoj03036
]
PHYSODRAFT_349205
Chromosome and associated proteins [BR:
psoj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
PHYSODRAFT_349205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
HEAT
HEAT_EZ
Cnd1
HEAT_2
Motif
Other DBs
NCBI-GeneID:
20649032
NCBI-ProteinID:
XP_009515905
JGI:
Physo3_349205
UniProt:
G4YPN3
LinkDB
All DBs
Position
Unknown
AA seq
1719 aa
AA seq
DB search
MIVVYPFYIYIFSNLSSVKQACFSLVLLVIKMAIKNGISYYIRSNRDMQPEIVVFNVDVF
NALFVSFSMQNSTSKLTVIVIMAVDFVRMTSSIREVLRLAQELKTVENQIHLLRNLEPAS
FQAIDKQKSGLGRACSISNPHFDAKAQECRIPETALTDSKRVKHLPRPLTTESQNTLVFM
ERLYARKMLNLLYLVEFTILIEYIEVIVPVVYLLHHNELDRTLWGPASTVGRSRVTDTAI
YIQLALVALLGITSVLDYDKPEAVRLAASGVALLMYFRSTALFIRLMMFVCAIVLYGDVL
APVVRIARAGEVLPLQTAKLLLHCIWIWNMLRILCAVFRSGALTSGARKKHPMQGARRMR
PKVATMRGGLFLFPLYVDPQDAAAADAREEMHPVASQPAAHTEAVNPQRLATLIRSSPTG
RLGSADETTEIDADVLNSMPKWAQAVVQTGCFNSGAVQGLKPSPKNRLKRKLELQGKQEC
EQPQKRRSFGNCVSAESPIQDENGELQDCLDELNAEPDVDVEMDDEDELPTFSTQAEIAA
DSVEKYADLLERLLEKATQRQGLENFERDNLGVFSPQEVKLLLQTMKTLEKNDWINELDP
AILIALMSTLDVQQISTLVVSMIQACVPAGKLEAVESDPVFQESSEPSSTPDTVSEEKPL
KMDIVEAALGETRNSAQSLVRTLLKACWKKNEDRDNRVVLENFVEDLLVMFVRPEWIGAE
DVLEALCSSLASVLHANISADERNPDAHKSLAALNIVGKVCAAIKRYQKKVDHSALVDDS
DSTAVVEEHKNCLLEAIVGKKTRSRKTLPSACSDLVDLLAFKHIVVMHQQRKGSDQCDSR
KLLLLKFMSEAKVHWSDLESACMDREYMLWKTLAVETKGVTNSTFKVAIPTTELALRASL
QLAVKRRFCGLFDGLLVHIMALLSRAAPSLRARVMKCLRGIVDVDPMLMAESGVRSAVER
CCSDEKPSVREAAVDLIGTYVLLQPLLFDKYFDVLAERMRDKGIKVRKSVCKIFKIALTS
TQEQPHDANSEQELRRKSACMRCLVERVGDASEDQGVKNFIIDTFQEVWFGSELSSSKLS
SPLSEFGGGSTLPPGWTAVAIEDKSDAAEVNAKFVSDDGFVVNSVEEAWSSYRTPMVTPA
SVVKINDAKVDNSSEVVATIVEVIHGMPNLGWFAELLKRLLWGRNNGTRETAVRSVKNRS
AEIAIAEDRSEKIIDRLVNCLMDLQEGTLLIGVSIKDGHEQFEDAKIQNLSVSMIDSILR
VKRVSLSITSRLEEDLKYLKTKTFQCLVSMKELLLSEEQRLENGMASRSMDRSKSKKQQV
QGDQEADASLIGSVMQAELDSILLLSVQKIPQIRKEAVACIGALLTQGLVNPLQCIQNLV
ALETDRVSDVRDAAFSQLLALYERFRSEIHMPLIKGIHGSYSFQLSVYGNATALGIDDNK
EYCLFGRLYTNCLKPTKSHGLLLLKSLVNQFSDQGSVLKPLKATLATDNSKNFASRLKYL
FYLAQIISTLPYDVEDEPLYVIYLINQYVSLRLGPVLDDMKEAFATAGVAPDQLEDETAD
LSKMSIDEYRPLSSLPRSKLAAMKANGCIAFALALMLRLKFALKRNYQLDNEKCATYKPS
SRDPPVEARERSPKKLLLPSVDDLCQPDDPIELSWNLFLTAWLASRKDERQLDVDLQGQE
KLKASPKRRRRSRKVVARKQQHSSENDINEDDEFVDGFA
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtggtctaccctttctacatttacattttctctaatctatcgtccgtgaagcaa
gcctgtttctcgcttgtcctcctcgttatcaagatggccatcaagaatggaattagttac
tacattcgatccaacagggatatgcagccagaaatcgtcgtcttcaacgtcgacgtcttc
aatgcgctcttcgtgtcgttctccatgcagaactcgacgtcgaagctcactgtcattgtc
attatggcggttgactttgtgcgcatgacaagctccattcgggaggtactccggctagcc
caagagctcaagactgtggaaaaccaaatacacctgctcagaaatctcgagccggccagc
ttccaagcgatagataagcagaagagtgggctaggccgagcatgcagtattagcaacccg
cacttcgacgcaaaagcccaagaatgtcgaatacctgagacagccctcaccgacagtaag
cgggtgaagcatttgccacgtccgctcacaacagaatcgcaaaacaccttggttttcatg
gaaaggttgtacgccaggaagatgctaaatctcctgtatctcgtcgagttcacgattctc
atcgagtacatcgaggtcatcgtgcctgttgtctacttgcttcatcacaacgagctggat
cgcactctgtggggtcccgcgtcaactgttggccgctctcgagtgacagacaccgcaatc
tacatccagctggctttggtcgcgttactgggcataacgagcgtgctcgactatgacaag
ccagaggcagttcgtctcgcagcatctggggtcgcgctgctaatgtacttccgcagtact
gcgctgttcattcgcctgatgatgttcgtgtgtgcgatcgttctctatggagacgtgttg
gcccctgtcgtccgaattgcgagagcgggagaagtgcttccactgcagactgccaagttg
ttgctccactgcatttggatctggaacatgcttcggattctgtgcgctgtcttccggtcg
ggagcactcacgtctggagcgaggaagaaacatccgatgcaaggagcgcgccgcatgcgt
ccgaaggtggccacgatgcggggcggcctgttcctcttcccgctctacgtggacccacag
gatgccgcagctgcagatgcacgcgaagagatgcatcctgtagcctcgcagccagcagca
cacactgaagctgtcaacccgcagcggttggcgacgctcatccgctcctcacccaccggc
agactcggctcagccgacgagacgacagagatcgacgctgacgtgttgaactcgatgccc
aagtgggcgcaggcagtggtgcagactgggtgcttcaattctggagctgtccagggtctg
aagccatcacctaagaacaggttgaagagaaagttagagctgcaaggaaagcaagaatgc
gagcagccacagaagagacggtcatttggcaattgtgtgagtgctgagagcccgatacaa
gatgagaatggcgagctgcaagactgtctggatgaattgaacgccgagccagatgtggat
gtcgagatggatgatgaagacgagcttccgacgttttctactcaggctgaaattgctgca
gatagtgtggagaagtacgcagatttgctggagagattgcttgaaaaggcgacacaacgt
cagggtctggagaattttgaacgtgacaacttgggcgtattttcgccccaagaagtgaag
ctgctgttgcagacaatgaaaacgctggaaaagaacgactggattaatgaactggatcca
gcaatactgatcgcattgatgagcactttggacgtgcagcaaatttcaacactggttgta
tcgatgatacaagcgtgcgttcctgcaggaaagcttgaagcggtggaatccgaccctgtg
tttcaagaatcgtctgaaccttcgtctacacctgataccgtcagtgaagagaaacctttg
aagatggatattgtggaggctgcgctgggggagacgcgtaatagtgcacaatcgcttgtt
cggactctacttaaggcatgctggaagaagaacgaagatcgtgataatcgcgtcgtcttg
gagaacttcgtggaagatcttctcgtgatgtttgtacgtccggaatggattggcgcggaa
gacgtcctcgaggcattatgctcttcattagcgagtgtactgcacgcaaatatctccgca
gacgagagaaatcctgacgcacataaaagtttggcggcgctcaacatagtcggaaaggta
tgtgctgcaatcaagcgctaccagaagaaggttgatcacagtgccctagttgacgacagc
gactcgactgcagttgtggaagagcataaaaactgtctactagaagcaattgttggcaaa
aagacgcggtcgagaaaaacactgccgagtgcttgtagtgacttggttgacctgttagcc
ttcaagcatatcgtcgtgatgcatcagcaacggaaaggttctgatcagtgcgattcgagg
aagctgcttcttttgaagttcatgtcggaggcaaaggtacattggagtgatctcgagtca
gcgtgcatggatcgtgaatatatgctatggaaaacgttggcggtggagactaagggggtt
actaattcgacatttaaagtggctatccctacgaccgagttggcactaagagcgagtttg
cagttagctgtgaaacgtcgattttgtggtcttttcgatggcttgcttgtgcacatcatg
gctttgctctccagagctgcaccaagtctcagagctcgagttatgaaatgcttgcgaggg
attgtcgacgtcgatccgatgctaatggctgaaagcggagtccggtcagctgttgagagg
tgttgttcagatgaaaaaccctccgttcgcgaagcagccgtggatttgatcggtacttac
gtactactgcagccccttttgtttgacaaatactttgatgtgctggctgagagaatgcgt
gacaaaggcatcaaagttcgtaaaagcgtgtgcaaaattttcaagatcgctttgacatcg
acgcaagaacagccgcatgatgcgaattcagaacaggagcttcgccgcaaaagtgcatgc
atgagatgtcttgttgaacgagttggagacgcttctgaggatcaaggagtgaagaacttt
atcattgacactttccaagaagtttggtttggatccgagctttcttcctccaaactttcg
agccctttgagtgaattcggtggtggaagcaccttacccccaggctggactgctgtggca
atcgaagataagagcgatgctgcagaagtaaacgcaaagttcgtgtctgatgatgggttc
gttgtcaactccgtcgaagaagcgtggtcttcgtatcgaaccccaatggtgacgccagcc
agcgttgtgaaaattaacgatgcgaaggtggataacagttctgaagtcgtagctaccatt
gttgaagtcattcacggtatgccaaacctcgggtggtttgctgaacttttgaagaggctg
ttgtgggggcgcaacaatgggacgagggaaacggctgtgcgttctgtgaagaatcgatcg
gctgaaatcgcaattgctgaggaccgctccgaaaagataattgatcgtctcgtaaactgc
ctgatggacctacaagaaggcacacttctcattggcgtttcaatcaaagatggccacgaa
caattcgaggatgccaagattcagaatttgtcggtctcaatgatcgacagcattttgcgt
gtgaagcgcgtttcgctaagcattacttcgaggttggaagaagacttgaagtatctaaaa
acaaaaacgtttcaatgccttgtcagcatgaaggagttactgctttcagaagagcagcgc
ttggaaaacgggatggcttcacgttcgatggatcgatcgaagagtaaaaagcagcaagtt
caaggtgaccaggaagccgacgcctcgttgataggaagtgtcatgcaggcagaactggac
agtatattactactctcggtgcagaagataccacaaattcggaaggaggctgtagcttgc
attggggctctacttacccaaggcttggtgaacccattacagtgcattcagaatttggtg
gctttggagaccgatcgcgtttcagacgttcgggacgcagcattttctcagttgttggct
ctgtatgaacgattccggagtgaaattcatatgcctttgattaaaggtatccatggctct
tactcgttccaactgagcgtatatggcaacgcaacggcgttgggaatcgacgacaacaag
gagtactgcctctttgggaggctgtacaccaactgcctcaaaccaactaaatcgcacgga
ttgctacttctcaagtcattggttaaccagttttctgatcaaggaagtgtactgaagccg
ttgaaagctacattagccaccgacaacagcaagaacttcgcgagcagactgaaatatcta
ttctatctggcgcagatcatctcgacactgccgtacgatgtggaggacgaacctttgtac
gttatttatttgatcaaccagtacgtgagccttcgacttggccctgtgctggatgacatg
aaggaggcctttgcgacggcaggcgtggcaccagatcaactggaagacgaaacagcagat
ttgtcgaagatgagcatcgacgagtatcgccctctaagctcgctaccaaggtcgaagttg
gcggcgatgaaggccaacgggtgcattgcgttcgcgcttgctctaatgctccgcctgaag
tttgcgctcaagcgcaattaccagttggacaacgagaaatgcgcaacgtataagccatcg
tcgagagatcctccggttgaagcgagggagcgctctccaaagaagcttctgctgccgtca
gtcgatgacttgtgccagccagatgatcctattgagcttagctggaacctctttctgact
gcatggctcgcatctcgcaaagacgaaagacaactggacgttgatctacagggacaagaa
aaactcaaggcctctccgaagcgtcgacgtcgctcgcgcaaagttgtcgctcggaagcag
cagcactcatcggagaacgatatcaacgaggacgacgagttcgtcgatggcttcgcctga
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integrated database retrieval system