Phytophthora sojae: PHYSODRAFT_349766
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Entry
PHYSODRAFT_349766 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K11292
transcription elongation factor SPT6
Organism
psoj
Phytophthora sojae
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psoj03021
]
PHYSODRAFT_349766
03036 Chromosome and associated proteins [BR:
psoj03036
]
PHYSODRAFT_349766
Transcription machinery [BR:
psoj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
PHYSODRAFT_349766
Chromosome and associated proteins [BR:
psoj03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
PHYSODRAFT_349766
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
Tex_central_region
HTH_44
SPT6_acidic
YqgF
HHH_9
Spt6_S1
SH2
Tex_YqgF
HHH_3
Flag1_repress
Motif
Other DBs
NCBI-GeneID:
20649072
NCBI-ProteinID:
XP_009519091
JGI:
Physo3_349766
UniProt:
G4YWT3
LinkDB
All DBs
Position
Unknown
AA seq
1538 aa
AA seq
DB search
MTTSDDEMFGAGSPTVSDSDSDAVKQEKGSKKRKLSSKSKSKSKSKQAKRSVSDDEDEKK
PKSAFIEDMASESDDGEGGAASDDDDDDEDEGEDRNEYENDGFVVDDEDDEDSDDGETAR
HRRRRRKKEKKLKRLKQKVEEIDDEDLMLVRENMGMDTGPTHSDSEDEDMGGRSSRKVKN
EDDSGLMSRELSYRMFGDSDEEEEDSAPQRANNYLGNDEYESDDIDEFIVDDDEEGREGP
RRRRKQEPIPASMQGPSVYQMGEAEELFGDMDGFLEATSGKIPEDTPAKSKKAILLEKFE
PSVLKEHMMTSDVIAVRDHDLPERYQYLFKNREFPDAEDRAEESEWISDFIIKNLERRNQ
RNSAASRGEIVSAIDTVLRFYHDEKLEPAFVQRYCKEYWKVVGLHTENLYEILDLDVKWD
KLNRKRRSFQTGIQRVVDSSNAKESAFVRKCYEQLFGTPDEKTYKDLSEFFALDAQESSG
QDKESADHKYRRPVRRTFYQICTKAGLRPVSLAFTMNASVLGGIVAGVDHEDSNRDVPTP
EESPGVLAQKYTTKEFPTVDDVMKGARHIAASKVAAEPNVRKCIRELYRQNAVLSTEATA
KGREEIDEFHYCHGLQYIEKMPVLEVFEAGDLWLKIARAEKEGLLKITIINEKAQDLMDP
LEPIYLSQGNDSDEEWQSQRHLVLQEAINSFMILSFENELKRDLTVSSRDVVVKMCGNAL
RERLSVRPYEPADGVDPFIVSIWVENTMDSIAHIVALDVNGELVDKTEGYCKRDLNNIQK
LSATLLKFLTEHSQTHVVVINVSAGMKCMDMGGVVDEVRRLLGRDDASRFGNRDGHDFLD
IVFLKDDVPNMFSRSKRADQEFPEESEYVRAAIGLGRYLRNPASELCAMWGNVAMNEPSR
GRELLFLNVHMMQHSLVKDLLLTEYDRVFVQVINKYGVDINLLANHKHTSYQLQFICGLG
PVKAASVLDKVRAKNYVERRQELLSKGFVGKIVYRNCAGFIRIRERDALREAPLNPLDDT
RIHPESYYMAVKICGDANNNSTIDMYDPNHYSYAVEDTMYQSASAIRSRNAPPNTRLGDA
EIQDVLSELDLSAYAGRLELQKKGPKLLTLEYIKRELRYPYFDKRAKYQVPKDEDLFFLL
NGETRETLRIGMIVPATLLHMSGDEFVRVRLQSGMRSSLHRERLPDYLSDVRPQTFPKGI
TVNAKILAIQSDREGRYELQLGCNRRSLIDMSMCFYPERFPRYTNSKLVESDSMERVDRL
LNEPPAEEDKATTFTQATRVQGSHPSRRKKRQIAHPLFRNINCQTAMQYLREQPVGEVVI
RPSTLGTDHLTLTWKMLDGVYRHFDIQEKDKPSEARIGQTLIIKEEKYENIDELIARFVD
PMNSLVDDVIRYKYYKNVSKESVEEDLIKQKKEHPSRIPYALHVYSKFPGCFSITYIARE
TPRSCHMEVKSGGFRFFGRIESSILPTLSQALQFFKMKALVAPTSSSSRSASYHNNDRSS
GPFAQRSSAPYSGSGGRPRQSSRWDDRRGGGDAGGRRW
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgtcagacgacgagatgttcggggccgggtcccccaccgtgtccgactcggac
tcggacgccgtcaagcaggagaagggcagcaagaagcgcaagctcagcagcaagagcaaa
agcaagagcaagagcaagcaggccaagcgctccgtgagcgacgacgaggacgagaagaag
cccaagtcggccttcatcgaggacatggcgtccgagagcgacgacggggagggaggcgcc
gcctcggacgacgatgacgacgacgaggacgagggcgaggaccgcaacgagtacgagaac
gacggcttcgtggtggatgacgaggacgacgaggactcggacgacggggagaccgcgcgc
caccgccgtcgtcgccgcaagaaagagaagaagctcaagcgtctgaaacagaaggtggag
gagatcgatgacgaagatctcatgctcgtgcgcgagaacatgggcatggacacgggcccg
acccatagtgacagcgaagacgaggacatgggcggacgctcgtcgcgcaaggtgaaaaac
gaggacgactcgggcctcatgtcgcgcgagctcagctaccgcatgttcggcgactcggac
gaggaggaggaagactcggccccgcagcgcgccaacaactacctcggcaatgatgagtac
gaaagtgacgatatcgacgagttcatcgtggacgatgacgaggaaggacgtgagggacca
cgtcgccgcaggaaacaggagccgatcccagcgtccatgcagggcccgtcggtgtatcag
atgggtgaggccgaggagctctttggagacatggacggattcctggaggccaccagcggt
aagatcccggaggacacgcctgcgaagtcgaagaaggctatcctgctggagaagtttgag
cctagcgtgctgaaggagcacatgatgacgtccgacgtcatcgcggtgcgcgaccacgat
ttaccggagcgataccagtacctcttcaagaaccgcgagttcccggacgcggaggaccgt
gctgaggaatccgaatggatcagtgactttattatcaagaaccttgaacggcggaaccag
cgtaactctgccgcgtcgcgtggcgaaattgtgtcggctattgacactgtcttgcgtttc
tatcacgatgagaagctcgagccggcgttcgtgcagcgctactgcaaggagtactggaaa
gtggtgggcctgcacacggaaaacctgtacgagattctggatctcgatgttaagtgggat
aagttgaatcgcaagcggaggtcattccagaccggtatccagcgagtggtcgactcatcg
aatgcaaaggaatcagccttcgtgcgtaagtgctacgaacagttgttcggcaccccggac
gagaagacgtacaaggatctgtccgagttcttcgctctggatgcgcaggagtctagcgga
caggacaaggagagcgcggatcacaagtaccgccgtcctgtccgtcgtacgttctatcag
atctgcaccaaggcaggattgcgtcccgtttctctggcttttacgatgaatgcgtcggtg
cttggtggtatcgtggctggcgtggaccacgaagattccaaccgtgacgtcccgaccccc
gaagaaagccctggtgttctggcgcagaagtatacgacgaaggagtttccaactgtggat
gatgttatgaagggtgctcgccacattgccgccagtaaggttgcggcagagcctaacgtt
cgcaagtgcattcgcgagctgtaccgccagaacgctgttttgagcacggaggcaactgcc
aagggccgcgaggagatcgatgaattccactattgtcacggtctgcaatacatcgagaag
atgccggttctggaggtttttgaagccggagatctgtggcttaagattgctcgtgccgaa
aaggaaggtctactgaagattacgatcatcaatgagaaggcccaagatctgatggacccg
ctggagccgatctatctgtcccaaggcaacgattccgacgaggagtggcaaagccagcgt
catcttgttctccaggaggcgatcaacagtttcatgatcttgtcgttcgaaaacgagctc
aagcgtgacctgacagtgtcttctcgcgatgtggtcgtgaaaatgtgtggaaatgcgctg
cgggaaaggttgtctgtgcgtccgtacgagccggccgatggtgtggacccgtttattgtt
tcaatctgggttgaaaacactatggattccattgcgcatattgtggctcttgacgtgaac
ggagaactggtcgataaaacggagggatactgcaagcgagatctgaacaacatccaaaag
ctgtcggccacgctgctgaagttccttacggagcactcgcaaacacatgtcgtggtcatt
aacgtttccgccggaatgaagtgcatggacatgggtggagtggtcgatgaagttcgacgc
ttgctgggtcgagacgatgcttctcgcttcggaaacagggatggtcacgacttccttgac
attgttttcctgaaagatgatgtcccgaacatgttcagtcgctccaagcgcgccgatcag
gagtttcctgaggaatctgaatacgttcgtgctgcaattggccttggacgctatttgagg
aatccagcgtctgagttgtgcgcgatgtggggaaatgttgccatgaacgaaccgagtcgt
ggccgtgagctgctgttcttaaatgttcacatgatgcagcactctcttgtgaaggacctt
ctcctgacggagtacgaccgtgttttcgttcaagtgatcaacaagtacggtgttgacatc
aatttgctggctaaccacaagcatacatcgtaccaactgcagttcatttgtggtctgggt
cctgtgaaggcggcatcagttctggataaggttcgtgcaaagaactacgttgaacgacgc
caagaacttctttccaagggtttcgttggtaagattgtataccgcaactgtgccggattt
attcgcatccgtgagcgtgatgccttgcgtgaagccccgttgaatccgctggatgacacc
cgtatccaccccgaaagctattacatggcagtgaagatctgtggtgatgctaacaacaac
tcgacgattgacatgtacgacccgaatcactattcgtacgcggtggaggacacgatgtac
cagtcagcgtctgcaattcgaagccgaaatgccccgccaaacacccggctcggtgatgca
gaaattcaagatgtattgtccgagctcgacctgtctgcctacgctggtcgtcttgagctt
cagaagaagggaccgaaacttctgacgctggagtacatcaagcgcgagctgcgatacccc
tacttcgacaagcgtgcaaagtaccaggtgccgaaggatgaggacttgttcttcttgctc
aacggtgaaacgcgggagacgctgcgtatcggcatgatcgttcctgccacgctgctacac
atgtcaggcgacgaattcgttcgagtccgtttgcagagcggtatgcgctcaagtctgcac
cgcgagcgactgccagactacctctcggacgtacgccctcagacgttccccaagggcatt
acggtgaatgccaagattctggcaattcagtcggatcgcgaaggtcgctacgagctgcag
cttggatgcaaccgccgctcgctcatcgacatgtcgatgtgtttctatccagagcggttc
ccgcgatacacgaactccaagttggtcgagagcgacagcatggagcgcgtagatcgcctg
ttgaacgaacctccagctgaggaagacaaggcgactacgtttactcaggctacccgcgtt
caaggcagtcacccttcgaggcgcaaaaagcgacagattgcgcaccccttgttccgcaac
atcaactgtcagacggcaatgcagtacctgcgagagcagcccgttggagaagtggttatt
cgtccgagtactctgggcaccgatcatctcacactgacgtggaaaatgctggatggtgtg
taccgacacttcgatattcaagaaaaagacaaaccgtctgaagcccgcattggccagacg
ttgattatcaaggaagagaagtacgagaacatcgacgagctgatcgcccgctttgtggac
cctatgaacagcttggtggacgatgtgattcgctacaagtactacaagaacgtctcgaag
gaaagtgtcgaggaggatctgatcaagcagaagaaggagcacccgtcgcgcattccgtac
gcgttgcacgtgtacagcaagtttcccggctgcttctcaatcacgtatatcgcgcgtgaa
acgccccgcagctgccacatggaggtcaagtcgggaggcttccgtttctttggccgcatc
gagtcgtctatcttgccgacgctgtcgcaggcgctgcagtttttcaagatgaaggcgctg
gtggctccgacgtcaagttcctcccgctccgcttcgtaccacaacaatgatagaagcagc
ggaccgttcgcccaacgctccagtgcgccgtactcaggcagcggtggacgtcctcgccag
agttcgcgctgggacgatcgtcgcggtggcggcgatgcagggggtcgccgttggtaa
DBGET
integrated database retrieval system